RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 DSEQ9UL01 958 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.9□□□□□ -0.34
TPM1-216ENST00000558910 ARHGEF37A1IGU5 675 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 KIAA0391O15091 583 aaKnown RBP12.89□□□□□ -0.35
TPM1-216ENST00000558910 NR3C1P04150 777 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 CYP11A1P05108 521 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 PLA2G5P39877 138 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 PNPLA4P41247 253 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 TSPY1Q01534 308 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 PSMD2Q13200 908 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 PLD1Q13393 1074 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 MYBPC2Q14324 1141 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 PSMD6Q15008 389 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 SURF1Q15526 300 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 TEAD2Q15562 447 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 BMT2Q1RMZ1 405 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 CENPPQ6IPU0 288 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 SLC44A3Q8N4M1 653 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 ASIC4Q96FT7 647 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 EPS15L1Q9UBC2 864 aa12.89□□□□□ -0.35
TPM1-216ENST00000558910 MAGED2Q9UNF1 606 aaPredicted RBP12.89□□□□□ -0.35
TPM1-216ENST00000558910 FAM237AA0A1B0GTK4 181 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 A0A1W2PRU2 124 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
TPM1-216ENST00000558910 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 CALUO43852 315 aaPredicted RBP12.88□□□□□ -0.35
TPM1-216ENST00000558910 ATP2C2O75185 946 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
TPM1-216ENST00000558910 C1RP00736 705 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 LMO2P25791 158 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 RAP1GAPP47736 663 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 MYL6P60660 151 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 DLG4P78352 724 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 MYL7Q01449 175 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 POU5F1Q01860 360 aaKnown RBP12.88□□□□□ -0.35
TPM1-216ENST00000558910 HTR4Q13639 388 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 GRM2Q14416 872 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 STXBP5Q5T5C0 1151 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 SCN4BQ8IWT1 228 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 DCP1BQ8IZD4 617 aaKnown RBP12.88□□□□□ -0.35
TPM1-216ENST00000558910 FMR1NBQ8N0W7 255 aaPredicted RBP12.88□□□□□ -0.35
TPM1-216ENST00000558910 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 CXorf38Q8TB03 319 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 ZSWIM3Q96MP5 696 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 TMUB1Q9BVT8 246 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 PLA2G2FQ9BZM2 168 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 DNAJC25Q9H1X3 360 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 KCTD10Q9H3F6 313 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 ZNF334Q9HCZ1 680 aaPredicted RBP12.88□□□□□ -0.35
TPM1-216ENST00000558910 IGSF9Q9P2J2 1179 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 GTF3C4Q9UKN8 822 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 DENND4AQ7Z401 1863 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 WDFY4Q6ZS81 3184 aa12.88□□□□□ -0.35
TPM1-216ENST00000558910 RHOBTB3O94955 611 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 NR2F2P24468 414 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 CYP2F1P24903 491 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
TPM1-216ENST00000558910 VIPR2P41587 438 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 TNNC1P63316 161 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 GPC5P78333 572 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 CYP4F8P98187 520 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
TPM1-216ENST00000558910 DDR2Q16832 855 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 SOWAHAQ2M3V2 549 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 WDR72Q3MJ13 1102 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 TANGO2Q6ICL3 276 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 FBXL6Q8N531 539 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 GOLGA5Q8TBA6 731 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 CCDC34Q96HJ3 373 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 MRPL45Q9BRJ2 306 aaKnown RBP12.87□□□□□ -0.35
TPM1-216ENST00000558910 GZF1Q9H116 711 aaPredicted RBP12.87□□□□□ -0.35
TPM1-216ENST00000558910 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 DUSP12Q9UNI6 340 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 FRMD4BQ9Y2L6 1034 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 ZDBF2Q9HCK1 2354 aa12.87□□□□□ -0.35
TPM1-216ENST00000558910 MYBPHLA2RUH7 354 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 BIN1O00499 593 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 PDXKO00764 312 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 ZNF197O14709 1029 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 MYL1P05976 194 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 ATF6P18850 670 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 GABRR2P28476 465 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 CDH8P55286 799 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 CYP27A1Q02318 531 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 IFRD2Q12894 506 aaPredicted RBP12.86□□□□□ -0.35
TPM1-216ENST00000558910 ORC1Q13415 861 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 VEPH1Q14D04 833 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 FAM78AQ5JUQ0 283 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 PRSS36Q5K4E3 855 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms