RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 ARMCX5Q6P1M9 558 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 FAM171BQ6P995 826 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 GPD1LQ8N335 351 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ELMOD1Q8N336 334 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 DCLK2Q8N568 766 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 TOP6BLQ8N6T0 577 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 LRRC52Q8N7C0 313 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 SPPL2BQ8TCT7 592 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 PLEKHO2Q8TD55 490 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 GIPC2Q8TF65 315 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 C2orf15Q8WU43 125 aaKnown RBP5.97□□□□□ -1.45
SMAD3-209ENST00000558894 LEO1Q8WVC0 666 aaPredicted RBP5.97□□□□□ -1.45
SMAD3-209ENST00000558894 SCFD1Q8WVM8 642 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 FAM3CQ92520 227 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ZNF516Q92618 1163 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 CHAMP1Q96JM3 812 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ZFYVE19Q96K21 471 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 MYRFLQ96LU7 910 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 SLC22A12Q96S37 553 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 SEPT5Q99719 369 aaPredicted RBP5.97□□□□□ -1.45
SMAD3-209ENST00000558894 C7orf25Q9BPX7 421 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 FAM83CQ9BQN1 747 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ACBD6Q9BR61 282 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ANP32EQ9BTT0 268 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 MTMR12Q9C0I1 747 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 SMG9Q9H0W8 520 aaKnown RBP5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ATXN3LQ9H3M9 355 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 TASP1Q9H6P5 420 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 TMEM206Q9H813 350 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 CRTAC1Q9NQ79 661 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 HPS4Q9NQG7 708 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ASH1LQ9NR48 2969 aaKnown RBP5.97□□□□□ -1.45
SMAD3-209ENST00000558894 INTS13Q9NVM9 706 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 SPATA6Q9NWH7 488 aaPredicted RBP5.97□□□□□ -1.45
SMAD3-209ENST00000558894 OBP2AQ9NY56 170 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 GTSE1Q9NYZ3 720 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 HSPBP1Q9NZL4 362 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ITGA11Q9UKX5 1188 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 DSEQ9UL01 958 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 PCDHA7Q9UN72 937 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 EXOC7Q9UPT5 735 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 CCL26Q9Y258 94 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 ZDHHC9Q9Y397 364 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 PIAS3Q9Y6X2 628 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 CEP250Q9BV73 2442 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 MYH10P35580 1976 aa5.97□□□□□ -1.45
SMAD3-209ENST00000558894 GPR179Q6PRD1 2367 aa5.96□□□□□ -1.45
SMAD3-209ENST00000558894 BPTFQ12830 3046 aa5.96□□□□□ -1.45
SMAD3-209ENST00000558894 PLXND1Q9Y4D7 1925 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 PTPRZ1P23471 2315 aaPredicted RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 SLC38A8A6NNN8 435 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 SOBPA7XYQ1 873 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 SPECC1L-ADORA2AF8WAN1 911 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 TULP1O00294 542 aaPredicted RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 MAN2B1O00754 1011 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 ZNF263O14978 683 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 EIF3DO15371 548 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 LAMTOR5O43504 91 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 PAPSS2O95340 614 aaPredicted RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 FGF19O95750 216 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 F13A1P00488 732 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 ZSCAN22P10073 491 aaPredicted RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CCNE1P24864 410 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CYP2F1P24903 491 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CTHP32929 405 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 TXLNAP40222 546 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 PNPLA4P41247 253 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CLDN10P78369 228 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 ZXDBP98169 803 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 TFAMQ00059 246 aaKnown RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 SATB1Q01826 763 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CSTF1Q05048 431 aaKnown RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 TNK2Q07912 1038 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 DMWDQ09019 674 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 SMARCB1Q12824 385 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CUL4BQ13620 913 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CCINQ13939 588 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 STK38Q15208 465 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 DDR2Q16832 855 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 MGAT5BQ3V5L5 792 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CFAP221Q4G0U5 840 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 GPR158Q5T848 1215 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 SDHAF4Q5VUM1 108 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 RESP18Q5W5W9 173 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 Q6ZS52 159 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 DPH6Q7L8W6 267 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 ITIH5Q86UX2 942 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CCDC65Q8IXS2 484 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 THEM5Q8N1Q8 247 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 TMEM86AQ8N2M4 240 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CSGALNACT2Q8N6G5 542 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 SPATA18Q8TC71 538 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 TMEM174Q8WUU8 243 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 EZH1Q92800 747 aaPredicted RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 USP13Q92995 863 aaPredicted RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 E2F7Q96AV8 911 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 DHX58Q96C10 678 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 TRMT2BQ96GJ1 504 aaKnown RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 ZNF560Q96MR9 790 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 PI4K2AQ9BTU6 479 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms