RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 RNF225M0QZC1 329 aaPredicted RBP11.14□□□□□ -0.63
MARK3-213ENST00000558611 CYP26A1O43174 497 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 TCEA3O75764 348 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 TUSC2O75896 110 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 NTRK1P04629 796 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 PARP1P09874 1014 aaKnown RBP11.14□□□□□ -0.63
MARK3-213ENST00000558611 CLEC2LP0C7M8 214 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 ALAS1P13196 640 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 CYBAP13498 195 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 PDCP20941 246 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 MCM5P33992 734 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 RTP1P59025 263 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 TUSC3Q13454 348 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 RAPGEF1Q13905 1077 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 HSF5Q4G112 596 aaPredicted RBP11.14□□□□□ -0.63
MARK3-213ENST00000558611 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 GRAMD1CQ8IYS0 662 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 ANKRD35Q8N283 1001 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 IGDCC4Q8TDY8 1250 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 DDX11Q96FC9 970 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 NAA15Q9BXJ9 866 aaKnown RBP11.14□□□□□ -0.63
MARK3-213ENST00000558611 MYOTQ9UBF9 498 aa11.14□□□□□ -0.63
MARK3-213ENST00000558611 PFASO15067 1338 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 WDR19Q8NEZ3 1342 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 PRAMEF25A6NGN4 478 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 DTNBO60941 627 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 KRT72Q14CN4 511 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 MUM1Q2TAK8 710 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 MUM1L1Q5H9M0 696 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 PITRM1Q5JRX3 1037 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 MBNL2Q5VZF2 373 aaKnown RBP11.13□□□□□ -0.63
MARK3-213ENST00000558611 CCDC62Q6P9F0 684 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 UBE2Q1Q7Z7E8 422 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 CD163Q86VB7 1156 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 SLC2A13Q96QE2 648 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 CPVLQ9H3G5 476 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 PPCSQ9HAB8 311 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 LY9Q9HBG7 655 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
MARK3-213ENST00000558611 IMPACTQ9P2X3 320 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 MAD2L2Q9UI95 211 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 ASB1Q9Y576 335 aa11.13□□□□□ -0.63
MARK3-213ENST00000558611 UBA6A0AVT1 1052 aaPredicted RBP11.12□□□□□ -0.63
MARK3-213ENST00000558611 PRSS38A1L453 326 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 SH2B2O14492 632 aaPredicted RBP11.12□□□□□ -0.63
MARK3-213ENST00000558611 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
MARK3-213ENST00000558611 REC8O95072 547 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 IGLV1-40P01703 118 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 TFRCP02786 760 aaKnown RBP11.12□□□□□ -0.63
MARK3-213ENST00000558611 TAL1P17542 331 aaPredicted RBP11.12□□□□□ -0.63
MARK3-213ENST00000558611 SLC16A1P53985 500 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 FAM193AP78312 1265 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 PRKCQQ04759 706 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 GRM4Q14833 912 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
MARK3-213ENST00000558611 TMEM95Q3KNT9 176 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 UAP1L1Q3KQV9 507 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 TIGD7Q6NT04 549 aaPredicted RBP11.12□□□□□ -0.63
MARK3-213ENST00000558611 GALNT18Q6P9A2 607 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 DENND1CQ8IV53 801 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 FAM186BQ8IYM0 893 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 ADGRF4Q8IZF3 695 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 MSL3Q8N5Y2 521 aaKnown RBP11.12□□□□□ -0.63
MARK3-213ENST00000558611 FAM156AQ8NDB6 213 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 PARD3BQ8TEW8 1205 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 SEC14L1Q92503 715 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 FERMT2Q96AC1 680 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 MAF1Q9H063 256 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 EBF1Q9UH73 591 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 ACSL6Q9UKU0 697 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 OGDHLQ9ULD0 1010 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 NUMBLQ9Y6R0 609 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 DOCK5Q9H7D0 1870 aa11.12□□□□□ -0.63
MARK3-213ENST00000558611 KLRF2D3W0D1 207 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 NFIBO00712 420 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 NRDCO43847 1150 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 ALDH5A1P51649 535 aaPredicted RBP11.11□□□□□ -0.63
MARK3-213ENST00000558611 MVKQ03426 396 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 TROAPQ12815 778 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 ANO4Q32M45 955 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 TTC38Q5R3I4 469 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 ZBTB41Q5SVQ8 909 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 SRLQ86TD4 932 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 RTN4RL1Q86UN2 441 aaPredicted RBP11.11□□□□□ -0.63
MARK3-213ENST00000558611 DCP2Q8IU60 420 aaKnown RBP11.11□□□□□ -0.63
MARK3-213ENST00000558611 RBM12BQ8IXT5 1001 aaKnown RBP11.11□□□□□ -0.63
MARK3-213ENST00000558611 CAMKK1Q8N5S9 505 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 ANKS4BQ8N8V4 417 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 FAM133AQ8N9E0 248 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 ASB15Q8WXK1 588 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 FOXRED1Q96CU9 486 aaPredicted RBP11.11□□□□□ -0.63
MARK3-213ENST00000558611 NEK1Q96PY6 1258 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 POFUT1Q9H488 388 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 JMJD4Q9H9V9 463 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 CYP39A1Q9NYL5 469 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
MARK3-213ENST00000558611 NRBP1Q9UHY1 535 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms