RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 GPR62Q9BZJ7 368 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 CHST7Q9NS84 486 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 HCSTQ9UBK5 93 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 PYCARDQ9ULZ3 195 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 PPP2R2CQ9Y2T4 447 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 NME7Q9Y5B8 376 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 NLRC5Q86WI3 1866 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 NT5C1B-RDH14C9J2C7 533 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 I3L4J1 428 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 ZNF263O14978 683 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 LINC00271P0C7V0 271 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 SETSIPP0DME0 302 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 BRD2P25440 801 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 MSNP26038 577 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 TKTP29401 623 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 MAGEA1P43355 309 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 VAV2P52735 878 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 CENPCQ03188 943 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 KRT17Q04695 432 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 INTS6LQ5JSJ4 861 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 VARS2Q5ST30 1063 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 ACAD10Q6JQN1 1059 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 FAM171BQ6P995 826 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 DCP1BQ8IZD4 617 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 MYCBPAPQ8TBZ2 947 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 CYFIP2Q96F07 1278 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 TRIM11Q96F44 468 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 CALR3Q96L12 384 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 RTP3Q9BQQ7 232 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 ZSWIM1Q9BR11 485 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 HERC2P3Q9BVR0 1158 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 TSGA10Q9BZW7 698 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 UBE2OQ9C0C9 1292 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 SPTLC3Q9NUV7 552 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 SEPT11Q9NVA2 429 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 HESX1Q9UBX0 185 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 LZTS1Q9Y250 596 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 SSX2IPQ9Y2D8 614 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 PCDHA13Q9Y5I0 950 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 PCDHA11Q9Y5I1 949 aa15.79■□□□□ 0.12
VPS18-202ENST00000558474 TIMM13Q9Y5L4 95 aaPredicted RBP15.79■□□□□ 0.12
VPS18-202ENST00000558474 PJA2O43164 708 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 RB1P06400 928 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 H2AFZP0C0S5 128 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 SLC8A3P57103 927 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 SNX16P57768 344 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 NOMO3P69849 1222 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 CREMQ03060 361 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 SHHQ15465 462 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 C9orf50Q5SZB4 431 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 PPP1R26Q5T8A7 1209 aaPredicted RBP15.78■□□□□ 0.12
VPS18-202ENST00000558474 H2AFVQ71UI9 128 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 TMEM173Q86WV6 379 aaPredicted RBP15.78■□□□□ 0.12
VPS18-202ENST00000558474 GPIHBP1Q8IV16 184 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 CCAR2Q8N163 923 aaKnown RBP15.78■□□□□ 0.12
VPS18-202ENST00000558474 ANKRD52Q8NB46 1076 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 MSANTD4Q8NCY6 345 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 STK32AQ8WU08 396 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 BCL7CQ8WUZ0 217 aaPredicted RBP15.78■□□□□ 0.12
VPS18-202ENST00000558474 PIK3R5Q8WYR1 880 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 NOX5Q96PH1 765 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 PCDHB18PQ96TA0 734 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 PKMYT1Q99640 499 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 MIS12Q9H081 205 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 ZCWPW1Q9H0M4 648 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 DPEP3Q9H4B8 488 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 CYLDQ9NQC7 956 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 TSPAN16Q9UKR8 245 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 REXO2Q9Y3B8 237 aaKnown RBP15.78■□□□□ 0.12
VPS18-202ENST00000558474 BACE2Q9Y5Z0 518 aa15.78■□□□□ 0.12
VPS18-202ENST00000558474 ANKRD62A6NC57 917 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 BTNL10A8MVZ5 291 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 C5orf67F2Z3F1 127 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 KRT86O43790 486 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 TBC1D4O60343 1298 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 MICAL2O94851 1124 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 TMEM253P0C7T8 217 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 MYBL1P10243 752 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 BMPR1AP36894 532 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 PBX3P40426 434 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 NSFP46459 744 aaKnown RBP15.77■□□□□ 0.12
VPS18-202ENST00000558474 BCAT1P54687 386 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 CYP27A1Q02318 531 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 DSG1Q02413 1049 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 UBE3AQ05086 875 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
VPS18-202ENST00000558474 NFE2Q16621 373 aaPredicted RBP15.77■□□□□ 0.12
VPS18-202ENST00000558474 PKDCCQ504Y2 493 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 C4orf50Q6ZRC1 276 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 KIAA1328Q86T90 577 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 PHF13Q86YI8 300 aaPredicted RBP15.77■□□□□ 0.12
VPS18-202ENST00000558474 C12orf29Q8N999 325 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 ACRBPQ8NEB7 543 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 C2orf15Q8WU43 125 aaKnown RBP15.77■□□□□ 0.12
VPS18-202ENST00000558474 FUBP3Q96I24 572 aaKnown RBP eCLIP15.77■□□□□ 0.12
VPS18-202ENST00000558474 DESI2Q9BSY9 194 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 UBXN6Q9BZV1 441 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 CRTAC1Q9NQ79 661 aa15.77■□□□□ 0.12
VPS18-202ENST00000558474 PCDH10Q9P2E7 1040 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms