RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 METTL14Q9HCE5 456 aaKnown RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 ASAH2Q9NR71 780 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 KIAA1468Q9P260 1216 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 ZMYM5Q9UJ78 669 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 MAN1B1Q9UKM7 699 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 PTPRJQ12913 1337 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 RIF1Q5UIP0 2472 aaKnown RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 C5orf42Q9H799 3197 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 SOBPA7XYQ1 873 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 ANHXE9PGG2 379 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 SLC16A3O15427 465 aaKnown RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 GNA14O95837 355 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 HAPLN1P10915 354 aaPredicted RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 SIGLEC14Q08ET2 396 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 MORC3Q14149 939 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 ZNF699Q32M78 642 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 MGAT5BQ3V5L5 792 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 CFAP221Q4G0U5 840 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 TDRD10Q5VZ19 366 aaKnown RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 KRT39Q6A163 491 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 ANKRD40Q6AI12 368 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 FAM171BQ6P995 826 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 VSTM1Q6UX27 236 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 TRIM67Q6ZTA4 783 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 GET4Q7L5D6 327 aaPredicted RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 BMP8AQ7Z5Y6 402 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 FRMD5Q7Z6J6 570 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 SPATA2LQ8IUW3 424 aaPredicted RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 SMYD4Q8IYR2 804 aaPredicted RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 TTC39CQ8N584 583 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 OR6B3Q8NGW1 331 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 FAM200AQ8TCP9 573 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 PLEKHO2Q8TD55 490 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 ERCC4Q92889 916 aaPredicted RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 PSMG2Q969U7 264 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 TNIP3Q96KP6 325 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 CEP63Q96MT8 703 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 MYADMQ96S97 322 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 TMEM209Q96SK2 561 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 XYLT2Q9H1B5 865 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 FAM124BQ9H5Z6 455 aaPredicted RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 TMEM8AQ9HCN3 771 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 EHD2Q9NZN4 543 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 CEP72Q9P209 647 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 MAGEC2Q9UBF1 373 aaPredicted RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 NXF1Q9UBU9 619 aaKnown RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 ARMCX3Q9UH62 379 aaPredicted RBP9.07□□□□□ -0.96
TPM1-213ENST00000558400 GTF3C4Q9UKN8 822 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 YIPF1Q9Y548 306 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 VWA8A3KMH1 1905 aa9.07□□□□□ -0.96
TPM1-213ENST00000558400 PDCD11Q14690 1871 aaKnown RBP9.06□□□□□ -0.96
TPM1-213ENST00000558400 SCN1AP35498 2009 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 A8MXQ7 604 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 N4BP1O75113 896 aaKnown RBP9.06□□□□□ -0.96
TPM1-213ENST00000558400 CLSTN1O94985 981 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 VNN2O95498 520 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 ASS1P00966 412 aaKnown RBP9.06□□□□□ -0.96
TPM1-213ENST00000558400 PDGFRBP09619 1106 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 CSH1P0DML2 217 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 CSH2P0DML3 217 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 LMO2P25791 158 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 MAGEA11P43364 429 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 GCLMP48507 274 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 DLG4P78352 724 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 NTHL1P78549 312 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 CETN1Q12798 172 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 TCF15Q12870 199 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 CAMK4Q16566 473 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 ARHGAP15Q53QZ3 475 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 WDR44Q5JSH3 913 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 SCARA3Q6AZY7 606 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 ISM2Q6H9L7 571 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 UNC93AQ86WB7 457 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 ZC3H3Q8IXZ2 948 aaKnown RBP9.06□□□□□ -0.96
TPM1-213ENST00000558400 SLC44A3Q8N4M1 653 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 MLKLQ8NB16 471 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 ITFG1Q8TB96 612 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 MYCBPAPQ8TBZ2 947 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 KBTBD7Q8WVZ9 684 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 E2F7Q96AV8 911 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 SEPT5Q99719 369 aaPredicted RBP9.06□□□□□ -0.96
TPM1-213ENST00000558400 SYT15Q9BQS2 421 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 CYP3A43Q9HB55 503 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 HCFC1R1Q9NWW0 138 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
TPM1-213ENST00000558400 UXTQ9UBK9 157 aaPredicted RBP9.06□□□□□ -0.96
TPM1-213ENST00000558400 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
TPM1-213ENST00000558400 ZFHX2Q9C0A1 2572 aaPredicted RBP9.06□□□□□ -0.96
TPM1-213ENST00000558400 MYBPHLA2RUH7 354 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PPP1R3GB7ZBB8 358 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 BIN1O00499 593 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PMM2O15305 246 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 VNN1O95497 513 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 HLA-DRAP01903 254 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 ASGR2P07307 311 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 MYL4P12829 197 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PRKCSHP14314 528 aaPredicted RBP9.05□□□□□ -0.96
TPM1-213ENST00000558400 PTPN1P18031 435 aaKnown RBP9.05□□□□□ -0.96
TPM1-213ENST00000558400 ACAT1P24752 427 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms