RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CCDC142Q17RM4 750 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 TXNDC8Q6A555 127 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
TPM1-211ENST00000558314 TXNDC11Q6PKC3 985 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 Q6ZS52 159 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 NELFCDQ8IXH7 590 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 SPRYD3Q8NCJ5 442 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 SECISBP2LQ93073 1101 aaKnown RBP16.7■□□□□ 0.26
TPM1-211ENST00000558314 RMDN1Q96DB5 314 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 GTF3C4Q9UKN8 822 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 FRMD3A2A2Y4 597 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 CHRNB1P11230 501 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 CTHP32929 405 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 CXCL12P48061 93 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 MYO1EQ12965 1108 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 NFE2Q16621 373 aaPredicted RBP16.69■□□□□ 0.26
TPM1-211ENST00000558314 INTS6LQ5JSJ4 861 aaKnown RBP16.69■□□□□ 0.26
TPM1-211ENST00000558314 OSTM1Q86WC4 334 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 CBWD2Q8IUF1 395 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 SPATA2LQ8IUW3 424 aaPredicted RBP16.69■□□□□ 0.26
TPM1-211ENST00000558314 ADGRF2Q8IZF7 708 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 ZNF687Q8N1G0 1237 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 ZBTB44Q8NCP5 570 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 OR5B17Q8NGF7 314 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 MRPS31Q92665 395 aaKnown RBP16.69■□□□□ 0.26
TPM1-211ENST00000558314 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 GKN1Q9NS71 199 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 RAB23Q9ULC3 237 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 USP18Q9UMW8 372 aa16.69■□□□□ 0.26
TPM1-211ENST00000558314 CHURC1-FNTBB4DL54 471 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 CLIC2O15247 247 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 FNTBP49356 437 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 CYP2J2P51589 502 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 NRLP54845 237 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 NLRP12P59046 1061 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 PSMC1P62191 440 aaKnown RBP16.68■□□□□ 0.26
TPM1-211ENST00000558314 AMPD3Q01432 767 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
TPM1-211ENST00000558314 HSCBQ8IWL3 235 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 CMTM8Q8IZV2 173 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 TMEM86AQ8N2M4 240 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 CELF5Q8N6W0 485 aaKnown RBP16.68■□□□□ 0.26
TPM1-211ENST00000558314 LRRC52Q8N7C0 313 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 HPDLQ96IR7 371 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 MMS19Q96T76 1030 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 ACBD6Q9BR61 282 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 BLZF1Q9H2G9 400 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 INTS13Q9NVM9 706 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 HSPBP1Q9NZL4 362 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 SIX4Q9UIU6 781 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 GMEB2Q9UKD1 530 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 CCL26Q9Y258 94 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 PTPRJQ12913 1337 aa16.68■□□□□ 0.26
TPM1-211ENST00000558314 GPR179Q6PRD1 2367 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 MYBPHLA2RUH7 354 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 CUTAO60888 179 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 PDGFRBP09619 1106 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 CSH1P0DML2 217 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 CSH2P0DML3 217 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 DLATP10515 647 aaKnown RBP16.67■□□□□ 0.26
TPM1-211ENST00000558314 HMGA1P17096 107 aaKnown RBP16.67■□□□□ 0.26
TPM1-211ENST00000558314 CASP1P29466 404 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 RPL10AP62906 217 aaKnown RBP16.67■□□□□ 0.26
TPM1-211ENST00000558314 PLCB2Q00722 1185 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 DMWDQ09019 674 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 GAS6Q14393 721 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 ITPRIPL2Q3MIP1 535 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 DGLUCYQ7Z3D6 616 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 RALGPS2Q86X27 583 aaPredicted RBP16.67■□□□□ 0.26
TPM1-211ENST00000558314 IQUBQ8NA54 791 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 MSANTD3Q96H12 275 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 TRIM9Q9C026 710 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 EBF3Q9H4W6 596 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 OBP2AQ9NY56 170 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 COL4A2P08572 1712 aa16.67■□□□□ 0.26
TPM1-211ENST00000558314 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
TPM1-211ENST00000558314 LILRB5O75023 590 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 PPP6R2O75170 966 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 ATP2C2O75185 946 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 F11P03951 625 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 TNNI1P19237 187 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 PCSK1P29120 753 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 AFMP43652 599 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 ME1P48163 572 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 LHX1P48742 406 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 CYP27A1Q02318 531 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 SRSF5Q13243 272 aaKnown RBP16.66■□□□□ 0.26
TPM1-211ENST00000558314 E2F4Q16254 413 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 DUOXA2Q1HG44 320 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 SOWAHAQ2M3V2 549 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 DGKKQ5KSL6 1271 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 FAM26FQ5R3K3 315 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 C1orf228Q6PIY5 440 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 SHC4Q6S5L8 630 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 TMEM150AQ86TG1 271 aa16.66■□□□□ 0.26
TPM1-211ENST00000558314 SPEM1Q8N4L4 309 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms