RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 MAPK11Q15759 364 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 C1orf131Q8NDD1 294 aaKnown RBP12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 PRCCQ92733 491 aaPredicted RBP12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 CCDC126Q96EE4 140 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 RPF1Q9H9Y2 349 aaKnown RBP12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 CACNA2D2Q9NY47 1150 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 CLIC5Q9NZA1 410 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 CAPN6Q9Y6Q1 641 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 HEATR9A2RTY3 570 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 TPST1O60507 370 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 POLBP06746 335 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 ITGA1P56199 1179 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 ATAD3BQ5T9A4 648 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 CYP4A22Q5TCH4 519 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 PLEKHA8Q96JA3 519 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 BDH2Q9BUT1 245 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 TRIM54Q9BYV2 358 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 USE1Q9NZ43 259 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 STOML2Q9UJZ1 356 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 H7C0S8 307 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 ALOX12P18054 663 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 POLR2EP19388 210 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 NCF4Q15080 339 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 ERMARDQ5T6L9 678 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 TBC1D10CQ8IV04 446 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 ASZ1Q8WWH4 475 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 ECSITQ9BQ95 431 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 PUS3Q9BZE2 481 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 WDR12Q9GZL7 423 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 CASS4Q9NQ75 786 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 H2AFY2Q9P0M6 372 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 EMSYQ7Z589 1322 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 AP5Z1O43299 807 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 PEX3P56589 373 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 CDK16Q00536 496 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 TOP3AQ13472 1001 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 AAGABQ6PD74 315 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 METTL23Q86XA0 190 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 GALNT15Q8N3T1 639 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 PPHLN1Q8NEY8 458 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 FBXO28Q9NVF7 368 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 MAP3K15Q6ZN16 1313 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 INO80B-WBP1J3KQ70 363 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 TNPO2O14787 897 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 KIAA0391O15091 583 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 PRKAB2O43741 272 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 RGS20O76081 388 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 STIP1P31948 543 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 KCNJ1P48048 391 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 HERVK_113P62684 666 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 FOXD4Q12950 439 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 CTTNQ14247 550 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 SLC5A9Q2M3M2 681 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 USPL1Q5W0Q7 1092 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 PDPK2PQ6A1A2 396 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 CYB5R4Q7L1T6 521 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 RNF135Q8IUD6 432 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 DHRSXQ8N5I4 330 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 CCDC33Q8N5R6 958 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 C17orf80Q9BSJ5 609 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 ADAM33Q9BZ11 813 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 INO80BQ9C086 356 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 SPRTNQ9H040 489 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 ZNF263O14978 683 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 RIPK2O43353 540 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 TNFRSF21O75509 655 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 PSMB9P28065 219 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 JAK3P52333 1124 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 SESN2P58004 480 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 PTENP60484 403 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 TUBA1BP68363 451 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 CHRNDQ07001 517 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 EZH2Q15910 746 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 PKN2Q16513 984 aaKnown RBP12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 TIMM50Q3ZCQ8 353 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 TUBA3EQ6PEY2 450 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 TUBA1AQ71U36 451 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 OTULINQ96BN8 352 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 COX4I2Q96KJ9 171 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 B3GALT6Q96L58 329 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 MKNK1Q9BUB5 465 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 HSPBP1Q9NZL4 362 aa12.23□□□□□ -0.45
CSPG4P12-201ENST00000558282 E5RI56 91 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 GUCY1B2O75343 617 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 PSAPP07602 524 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 AKR1B1P15121 316 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 XPAP23025 273 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 CDC25CP30307 473 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 EFHC2Q5JST6 749 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 SEL1L3Q68CR1 1132 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 SCARA5Q6ZMJ2 495 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 RBM44Q6ZP01 1051 aaKnown RBP12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 PID1Q7Z2X4 250 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 ZNF677Q86XU0 584 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 LRRN4CLQ8ND94 238 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 PGBD4Q96DM1 585 aa12.22□□□□□ -0.45
CSPG4P12-201ENST00000558282 IFT43Q96FT9 208 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms