RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TAS1R2Q8TE23 839 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 MYLPFQ96A32 169 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 TNIP3Q96KP6 325 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 DUSP9Q99956 384 aaKnown RBP9.59□□□□□ -0.87
SPG11-207ENST00000558138 LPIN3Q9BQK8 851 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 RTP3Q9BQQ7 232 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 NIF3L1Q9GZT8 377 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 GZF1Q9H116 711 aaPredicted RBP9.59□□□□□ -0.87
SPG11-207ENST00000558138 RAB20Q9NX57 234 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.59□□□□□ -0.87
SPG11-207ENST00000558138 LIMD1Q9UGP4 676 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 USTQ9Y2C2 406 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.59□□□□□ -0.87
SPG11-207ENST00000558138 MYBPHLA2RUH7 354 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 DCXO43602 365 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 ATP2C2O75185 946 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 FGF19O95750 216 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 ASS1P00966 412 aaKnown RBP9.58□□□□□ -0.88
SPG11-207ENST00000558138 ASGR2P07307 311 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 HAPLN1P10915 354 aaPredicted RBP9.58□□□□□ -0.88
SPG11-207ENST00000558138 PTMSP20962 102 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 RFX1P22670 979 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 CYP2F1P24903 491 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 LMO2P25791 158 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 IFRD2Q12894 506 aaPredicted RBP9.58□□□□□ -0.88
SPG11-207ENST00000558138 ORC1Q13415 861 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 MTMR3Q13615 1198 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 DPCR1Q3MIW9 517 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 ARHGAP15Q53QZ3 475 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 C1orf220Q5T0J3 134 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 LRRTM3Q86VH5 581 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 ZDHHC14Q8IZN3 488 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 HS6ST3Q8IZP7 471 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 LEMD2Q8NC56 503 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 ST13P5Q8NFI4 369 aaPredicted RBP9.58□□□□□ -0.88
SPG11-207ENST00000558138 ITFG1Q8TB96 612 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 GPR152Q8TDT2 470 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 KBTBD7Q8WVZ9 684 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 MCRS1Q96EZ8 462 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 CNOT6LQ96LI5 555 aaKnown RBP9.58□□□□□ -0.88
SPG11-207ENST00000558138 MYADMQ96S97 322 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 RHOBTB2Q9BYZ6 727 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 XYLT2Q9H1B5 865 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 ATXN3LQ9H3M9 355 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 DPEP3Q9H4B8 488 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 VRTNQ9H8Y1 702 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 CD320Q9NPF0 282 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 TMLHEQ9NVH6 421 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 HSFX1Q9UBD0 423 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 CDH7Q9ULB5 785 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 ASB3Q9Y575 518 aa9.58□□□□□ -0.88
SPG11-207ENST00000558138 A0A1W2PRU2 124 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 GABRDO14764 452 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 TRIM66O15016 1216 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 AFPP02771 609 aaKnown RBP9.57□□□□□ -0.88
SPG11-207ENST00000558138 TPM2P07951 284 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 POU2F2P09086 479 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CSH1P0DML2 217 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CSH2P0DML3 217 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
SPG11-207ENST00000558138 GJA1P17302 382 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CEBPBP17676 345 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 PTPN1P18031 435 aaKnown RBP9.57□□□□□ -0.88
SPG11-207ENST00000558138 BDNFP23560 247 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 GABRR2P28476 465 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 FMO5P49326 533 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 GPR15P49685 360 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 NDST1P52848 882 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 YWHAEP62258 255 aaKnown RBP9.57□□□□□ -0.88
SPG11-207ENST00000558138 STX1AQ16623 288 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 PTPN21Q16825 1174 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 DDR2Q16832 855 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CBWD6Q4V339 395 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 ZNF394Q53GI3 561 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 HSP90AA4PQ58FG1 418 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CBWD3Q5JTY5 395 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CBWD5Q5RIA9 395 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 SDHAF4Q5VUM1 108 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CAVIN1Q6NZI2 390 aaKnown RBP9.57□□□□□ -0.88
SPG11-207ENST00000558138 MTSS1LQ765P7 747 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 DNAJB7Q7Z6W7 309 aaPredicted RBP9.57□□□□□ -0.88
SPG11-207ENST00000558138 ACOT1Q86TX2 421 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 ZC3H3Q8IXZ2 948 aaKnown RBP9.57□□□□□ -0.88
SPG11-207ENST00000558138 B3GALNT2Q8NCR0 500 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 STKLD1Q8NE28 680 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 FGF13Q92913 245 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 PSMG2Q969U7 264 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 FUBP3Q96I24 572 aaKnown RBP eCLIP9.57□□□□□ -0.88
SPG11-207ENST00000558138 CRISPLD1Q9H336 500 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 ABCB6Q9NP58 842 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CRTAC1Q9NQ79 661 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 ANO10Q9NW15 660 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 CEP72Q9P209 647 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 FBXL21Q9UKT6 434 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 ZFP37Q9Y6Q3 630 aaPredicted RBP9.57□□□□□ -0.88
SPG11-207ENST00000558138 DENND4AQ7Z401 1863 aa9.57□□□□□ -0.88
SPG11-207ENST00000558138 DPYSL4O14531 572 aa9.56□□□□□ -0.88
SPG11-207ENST00000558138 VNN2O95498 520 aa9.56□□□□□ -0.88
SPG11-207ENST00000558138 FAM163BP0C2L3 166 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms