RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PSMC1P62191 440 aaKnown RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 MAPRE1Q15691 268 aaKnown RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 USP41Q3LFD5 358 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 VARS2Q5ST30 1063 aaKnown RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 ZNF280DQ6N043 979 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 LCLAT1Q6UWP7 414 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 TMEM173Q86WV6 379 aaPredicted RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 CCAR2Q8N163 923 aaKnown RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 BCL7CQ8WUZ0 217 aaPredicted RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 CLP1Q92989 425 aaKnown RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 CYFIP2Q96F07 1278 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 PCDHB18PQ96TA0 734 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 ZSWIM1Q9BR11 485 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 TTPALQ9BTX7 342 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 UBE2OQ9C0C9 1292 aaKnown RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 FAM49BQ9NUQ9 324 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 INTUQ9ULD6 942 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 NENFQ9UMX5 172 aa17.9■□□□□ 0.46
SNX1-203ENST00000558040 REXO2Q9Y3B8 237 aaKnown RBP17.9■□□□□ 0.46
SNX1-203ENST00000558040 OR6C75A6NL08 312 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 M0QYV0 167 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 CAPN15O75808 1086 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 MICAL2O94851 1124 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 H2AFZP0C0S5 128 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 NSFP46459 744 aaKnown RBP17.89■□□□□ 0.45
SNX1-203ENST00000558040 KRT17Q04695 432 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 SHHQ15465 462 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 GOLGA7BQ2TAP0 167 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 INTS6LQ5JSJ4 861 aaKnown RBP17.89■□□□□ 0.45
SNX1-203ENST00000558040 C9orf50Q5SZB4 431 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 PPP1R26Q5T8A7 1209 aaPredicted RBP17.89■□□□□ 0.45
SNX1-203ENST00000558040 ACAD10Q6JQN1 1059 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 ANKS3Q6ZW76 656 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 H2AFVQ71UI9 128 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 PASD1Q8IV76 773 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 C12orf29Q8N999 325 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 MSANTD4Q8NCY6 345 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 RTP3Q9BQQ7 232 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 TSGA10Q9BZW7 698 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 ISCUQ9H1K1 167 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 TSPAN16Q9UKR8 245 aa17.89■□□□□ 0.45
SNX1-203ENST00000558040 TMCO5BA8MYB1 307 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 EFEMP2O95967 443 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 SOD2P04179 222 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 UNGP13051 313 aaPredicted RBP17.88■□□□□ 0.45
SNX1-203ENST00000558040 CDH5P33151 784 aaPredicted RBP17.88■□□□□ 0.45
SNX1-203ENST00000558040 SLC8A3P57103 927 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 NOMO3P69849 1222 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 CENPCQ03188 943 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 KIF5AQ12840 1032 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 CTXN3Q4LDR2 81 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 MDH1BQ5I0G3 518 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 NAA35Q5VZE5 725 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 KIAA1841Q6NSI8 718 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 DDX53Q86TM3 631 aaKnown RBP17.88■□□□□ 0.45
SNX1-203ENST00000558040 PALB2Q86YC2 1186 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 RNF168Q8IYW5 571 aaPredicted RBP17.88■□□□□ 0.45
SNX1-203ENST00000558040 DCP1BQ8IZD4 617 aaKnown RBP17.88■□□□□ 0.45
SNX1-203ENST00000558040 MYCBPAPQ8TBZ2 947 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 TRIM11Q96F44 468 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 NOX5Q96PH1 765 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 HNRNPABQ99729 332 aaKnown RBP17.88■□□□□ 0.45
SNX1-203ENST00000558040 HERC2P3Q9BVR0 1158 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 CRTAC1Q9NQ79 661 aa17.88■□□□□ 0.45
SNX1-203ENST00000558040 TRMT1Q9NXH9 659 aaKnown RBP17.88■□□□□ 0.45
SNX1-203ENST00000558040 ANKRD62A6NC57 917 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 ESPNB1AK53 854 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 KRT86O43790 486 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 ATP2C2O75185 946 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 FTLP02792 175 aaPredicted RBP17.87■□□□□ 0.45
SNX1-203ENST00000558040 CFHP08603 1231 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 SETSIPP0DME0 302 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 CCDC130P13994 396 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 ADORA2BP29275 332 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 SSTR3P32745 418 aaPredicted RBP17.87■□□□□ 0.45
SNX1-203ENST00000558040 BCAT1P54687 386 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 MRPL58Q14197 206 aaKnown RBP17.87■□□□□ 0.45
SNX1-203ENST00000558040 ARHGAP29Q52LW3 1261 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 KIAA0319Q5VV43 1072 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 DENND1BQ6P3S1 775 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 ZNF662Q6ZS27 426 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 ANKRD52Q8NB46 1076 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 C1orf131Q8NDD1 294 aaKnown RBP17.87■□□□□ 0.45
SNX1-203ENST00000558040 OR10T2Q8NGX3 314 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 SLC2A14Q8TDB8 520 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 CTNNBL1Q8WYA6 563 aaPredicted RBP17.87■□□□□ 0.45
SNX1-203ENST00000558040 PPP1R13BQ96KQ4 1090 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 GDF15Q99988 308 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 MED10Q9BTT4 135 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 TAS2R14Q9NYV8 317 aa17.87■□□□□ 0.45
SNX1-203ENST00000558040 KIAA1671Q9BY89 1806 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 MKI67P46013 3256 aaKnown RBP17.86■□□□□ 0.45
SNX1-203ENST00000558040 MYBPHLA2RUH7 354 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 PJA2O43164 708 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 FGF18O76093 207 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 TMEM253P0C7T8 217 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 MYBL1P10243 752 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 GLUD2P49448 558 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 PLCB3Q01970 1234 aa17.86■□□□□ 0.45
SNX1-203ENST00000558040 BST2Q10589 180 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms