RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 NUB1Q9Y5A7 615 aa10.54□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TIMM13Q9Y5L4 95 aaPredicted RBP10.54□□□□□ -0.72
IGKV2D-28-202ENST00000558026 HEMK1Q9Y5R4 338 aaPredicted RBP10.54□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TMEM131Q92545 1883 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 SMIM28A0A1B0GU29 152 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 FLRT2O43155 660 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TNFSF14O43557 240 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 BRINP1O60477 761 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 EDN1P05305 212 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 GABRG2P18507 467 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 CDC25CP30307 473 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 YWHABP31946 246 aaKnown RBP10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ARL2P36404 184 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 USP11P51784 963 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 MRPS21P82921 87 aaKnown RBP10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 UBAP2LQ14157 1087 aaKnown RBP10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 MTF1Q14872 753 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 RTP5Q14D33 572 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TMEM132AQ24JP5 1023 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 GAB4Q2WGN9 574 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 EML3Q32P44 896 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TXNDC8Q6A555 127 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 CENPPQ6IPU0 288 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 DBX2Q6ZNG2 339 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TMEM150AQ86TG1 271 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ERICH1Q86X53 443 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TMTC2Q8N394 836 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 CCDC26Q8TAB7 109 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 LGMNQ99538 433 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 NFKBIZQ9BYH8 718 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 FAM117AQ9C073 453 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ZDHHC5Q9C0B5 715 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ZMYND12Q9H0C1 365 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 FAM124BQ9H5Z6 455 aaPredicted RBP10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 RGL1Q9NZL6 768 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 CYP8B1Q9UNU6 501 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ASB3Q9Y575 518 aa10.53□□□□□ -0.72
IGKV2D-28-202ENST00000558026 NID2Q14112 1375 aa10.52□□□□□ -0.72
IGKV2D-28-202ENST00000558026 MTMR11A4FU01 709 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 LRRIQ4A6NIV6 560 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 HIP1O00291 1037 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 TRIM66O15016 1216 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 N4BP3O15049 544 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ZNF883P0CG24 379 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 CR2P20023 1033 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 MCM4P33991 863 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 MATKP42679 507 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 RIPPLY3P57055 190 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 TMPRSS3P57727 454 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 TARDBPQ13148 414 aaKnown RBP eCLIP10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 HLA-BQ31612 363 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 KIAA1614Q5VZ46 1190 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 PPP4R3CPQ6ZMV5 832 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 USP49Q70CQ1 688 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 EFCAB13Q8IY85 973 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ETNPPLQ8TBG4 499 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 GIPC2Q8TF65 315 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 OSCP1Q8WVF1 389 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ATP2A3Q93084 1043 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 C18orf25Q96B23 403 aaPredicted RBP10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ZMAT2Q96NC0 199 aaKnown RBP10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 GCNAQ96QF7 691 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 LXNQ9BS40 222 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 LNPKQ9C0E8 428 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 LINC00597Q9H2U6 94 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 SUSD2Q9UGT4 822 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 PPME1Q9Y570 386 aa10.52□□□□□ -0.73
IGKV2D-28-202ENST00000558026 MYOFQ9NZM1 2061 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ESYT2A0FGR8 921 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 GNSP15586 552 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ATF6P18850 670 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 LIG1P18858 919 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 LIFRP42702 1097 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 IFNAR2P48551 515 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 EOGTQ5NDL2 527 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ITIH5Q86UX2 942 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ZCCHC9Q8N567 271 aaKnown RBP10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 APPL2Q8NEU8 664 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ZNF419Q96HQ0 510 aaPredicted RBP10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 TMEM87BQ96K49 555 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 NRSN2Q9GZP1 204 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 POLR3FQ9H1D9 316 aaPredicted RBP10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 KIF9Q9HAQ2 790 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 C6orf50Q9HD87 102 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 GPRC5CQ9NQ84 441 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 PRMT7Q9NVM4 692 aaPredicted RBP10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 ANK1P16157 1881 aa10.51□□□□□ -0.73
IGKV2D-28-202ENST00000558026 CACNA1DQ01668 2161 aa10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 LARGE1O95461 756 aa10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 CER1O95813 267 aa10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 P4HBP07237 508 aaKnown RBP10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 HNF1BP35680 557 aa10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 KIR2DL1P43626 348 aaPredicted RBP10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 SLC6A11P48066 632 aa10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 NLRP12P59046 1061 aa10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 HNRNPUQ00839 825 aaKnown RBP eCLIP10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 YWHAHQ04917 246 aaPredicted RBP10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 GPR17Q13304 367 aa10.5□□□□□ -0.73
IGKV2D-28-202ENST00000558026 PRPF4BQ13523 1007 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms