RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SLC46A2Q9BY10 475 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 PCIF1Q9H4Z3 704 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 DDX43Q9NXZ2 648 aaKnown RBP14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 PATJQ8NI35 1801 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 ANK1P16157 1881 aa14.63□□□□□ -0.07
SNRPA1-204ENST00000558020 TCHHQ07283 1943 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 TICRRQ7Z2Z1 1910 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 COL4A3Q01955 1670 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 GOLGA8IPA6NC78 632 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 GOLGA8JA6NMD2 632 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 PPP6R2O75170 966 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 PRPF6O94906 941 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 CTHP32929 405 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 CNR2P34972 360 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 CASP5P51878 434 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 NLRP12P59046 1061 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 TOP6BLQ8N6T0 577 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 LINC00301Q8NCQ3 95 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 LEO1Q8WVC0 666 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 CBWD1Q9BRT8 395 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 PI4K2AQ9BTU6 479 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 BACH2Q9BYV9 841 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 IL21Q9HBE4 155 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 PDE11AQ9HCR9 933 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 GKN1Q9NS71 199 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 TDP1Q9NUW8 608 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 GTSE1Q9NYZ3 720 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 GMEB2Q9UKD1 530 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 MAGED2Q9UNF1 606 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 SMG5Q9UPR3 1016 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 SNX9Q9Y5X1 595 aa14.62□□□□□ -0.07
SNRPA1-204ENST00000558020 CDR1P51861 262 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 CYP4F8P98187 520 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 MAPRE1Q15691 268 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 DGLUCYQ7Z3D6 616 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 MON1AQ86VX9 555 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 SPATA2LQ8IUW3 424 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 MAB21L3Q8N8X9 362 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 FSIP1Q8NA03 581 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 TTC8Q8TAM2 541 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 RMDN1Q96DB5 314 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 HPDLQ96IR7 371 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 ZFYVE19Q96K21 471 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 LRRC3BQ96PB8 259 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 KIF9Q9HAQ2 790 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 INTS13Q9NVM9 706 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 KBTBD4Q9NVX7 518 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 GTF3C4Q9UKN8 822 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 L1RE1Q9UN81 338 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 OTOGLQ3ZCN5 2332 aa14.61□□□□□ -0.07
SNRPA1-204ENST00000558020 DMXL1Q9Y485 3027 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 A0A087X0B3 334 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 PRR5-ARHGAP8B1AHC4 643 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 EIF3DO15371 548 aaKnown RBP eCLIP14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 CUTAO60888 179 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 ATG13O75143 517 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 PRAMEF12O95522 483 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 YEATS4O95619 227 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 F11P03951 625 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 HSP90AA1P07900 732 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 HMGA1P17096 107 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 CYP2F1P24903 491 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 SOX9P48436 509 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 SNRPFP62306 86 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 ARHGAP8P85298 464 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 LMNB2Q03252 620 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 GRSF1Q12849 480 aaKnown RBP eCLIP14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 CFAP221Q4G0U5 840 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 INTS6LQ5JSJ4 861 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 C4orf50Q6ZRC1 276 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 ADGRF2Q8IZF7 708 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 TRMT2BQ96GJ1 504 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 FUBP3Q96I24 572 aaKnown RBP eCLIP14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 TRIM9Q9C026 710 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 MTMR12Q9C0I1 747 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 MAGEF1Q9HAY2 307 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 TMLHEQ9NVH6 421 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 EHD2Q9NZN4 543 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 NCANO14594 1321 aa14.6□□□□□ -0.07
SNRPA1-204ENST00000558020 GABRDO14764 452 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 PAPSS2O95340 614 aaPredicted RBP14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 TDGF1P13385 188 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 ACAT1P24752 427 aaKnown RBP14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 PDE6CP51160 858 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 ASIC1P78348 528 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 SATB1Q01826 763 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 TNK2Q07912 1038 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 RUNX3Q13761 415 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 PON2Q15165 354 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 PDGFRLQ15198 375 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 DDR2Q16832 855 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 SOWAHAQ2M3V2 549 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 TXNDC8Q6A555 127 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 LAIR1Q6GTX8 287 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 CNNM4Q6P4Q7 775 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 HS2ST1Q7LGA3 356 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 ZSWIM2Q8NEG5 633 aa14.59□□□□□ -0.07
SNRPA1-204ENST00000558020 ZNF507Q8TCN5 953 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms