RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 POU3F3P20264 500 aaPredicted RBP16.28■□□□□ 0.2
NEDD1-213ENST00000557644 USP8P40818 1118 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 TSPY1Q01534 308 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 RAB33AQ14088 237 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 MDH1BQ5I0G3 518 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 SLC4A11Q8NBS3 891 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 CLCN4P51793 760 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 ZNF75DP51815 510 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
NEDD1-213ENST00000557644 HYAL1Q12794 435 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 DUSP6Q16828 381 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 FAM171BQ6P995 826 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 ATAD1Q8NBU5 361 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 RBBP8NLQ8NC74 664 aaPredicted RBP16.28■□□□□ 0.2
NEDD1-213ENST00000557644 TMEM176AQ96HP8 235 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 OXCT2Q9BYC2 517 aaPredicted RBP16.28■□□□□ 0.2
NEDD1-213ENST00000557644 STK33Q9BYT3 514 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 TTYH3Q9C0H2 523 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 FAM49BQ9NUQ9 324 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 FSD2A1L4K1 749 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 F8VZ95 297 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 EPCAMP16422 314 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 ADCY1Q08828 1119 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 GPR17Q13304 367 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 CRYBG2Q8N1P7 616 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 TTC9BQ8N6N2 239 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 VN1R2Q8NFZ6 395 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 ZNF461Q8TAF7 563 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 JAKMIP2Q96AA8 810 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 PCED1BQ96HM7 432 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 TNIP3Q96KP6 325 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 FAM81BQ96LP2 452 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 RHOBTB2Q9BYZ6 727 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 CRISPLD1Q9H336 500 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 HCFC2Q9Y5Z7 792 aa16.27■□□□□ 0.2
NEDD1-213ENST00000557644 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 CLDN5O00501 218 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 ABLIM3O94929 683 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 RFX1P22670 979 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 ZNF132P52740 706 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 JAM2P57087 298 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 LILRA6Q6PI73 481 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 VSTM4Q8IW00 320 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 HEXIM2Q96MH2 286 aaKnown RBP16.27■□□□□ 0.19
NEDD1-213ENST00000557644 ABI2Q9NYB9 513 aaPredicted RBP16.27■□□□□ 0.19
NEDD1-213ENST00000557644 CEP72Q9P209 647 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 CNTN6Q9UQ52 1028 aa16.27■□□□□ 0.19
NEDD1-213ENST00000557644 MTMR11A4FU01 709 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 LINC01565O15544 149 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 CYP26A1O43174 497 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 GLUD1P00367 558 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 CCDC130P13994 396 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 FOSL2P15408 326 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 CYP27A1Q02318 531 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 CACNA2D4Q7Z3S7 1137 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 DCP1BQ8IZD4 617 aaKnown RBP16.26■□□□□ 0.19
NEDD1-213ENST00000557644 TTC39CQ8N584 583 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 MYCBPAPQ8TBZ2 947 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 SLC22A17Q8WUG5 538 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 CPLX3Q8WVH0 158 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 MYLPFQ96A32 169 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 FAM124BQ9H5Z6 455 aaPredicted RBP16.26■□□□□ 0.19
NEDD1-213ENST00000557644 GRPEL1Q9HAV7 217 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 SLC27A5Q9Y2P5 690 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 SEC24AO95486 1093 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 CCDC85BQ15834 202 aaPredicted RBP16.26■□□□□ 0.19
NEDD1-213ENST00000557644 SPECC1LQ69YQ0 1117 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 FAM71AQ8IYT1 594 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 BAP1Q92560 729 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 SPAG5Q96R06 1193 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 ZSWIM1Q9BR11 485 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 B3GNT5Q9BYG0 378 aa16.26■□□□□ 0.19
NEDD1-213ENST00000557644 SOAT2O75908 522 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 GYPCP04921 128 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 ATF2P15336 505 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 CLCN1P35523 988 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 DUSP4Q13115 394 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 SLC2A14Q8TDB8 520 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 TFAP2BQ92481 460 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 PPP2R3CQ969Q6 453 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 AFF4Q9UHB7 1163 aaKnown RBP16.25■□□□□ 0.19
NEDD1-213ENST00000557644 ITIH6Q6UXX5 1313 aa16.25■□□□□ 0.19
NEDD1-213ENST00000557644 GFPT2O94808 682 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 GLP2RO95838 553 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 CD19P15391 556 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 CYP2F1P24903 491 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 SSTR3P32745 418 aaPredicted RBP16.24■□□□□ 0.19
NEDD1-213ENST00000557644 KCNC3Q14003 757 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 PPP1R26Q5T8A7 1209 aaPredicted RBP16.24■□□□□ 0.19
NEDD1-213ENST00000557644 PAQR9Q6ZVX9 377 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 SLC47A2Q86VL8 602 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 FUKQ8N0W3 1084 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 ZNF518BQ9C0D4 1074 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 CYP4F11Q9HBI6 524 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 PLXNA3P51805 1871 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 ADCY5O95622 1261 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 BDNFP23560 247 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 BRD2P25440 801 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms