RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 REPS2Q8NFH8 660 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 KLHL14Q9P2G3 628 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 NENFQ9UMX5 172 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 MAFO75444 373 aaPredicted RBP16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 NPTXRO95502 500 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 ASS1P00966 412 aaKnown RBP16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 CD48P09326 243 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 LCP1P13796 627 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 ERFP50548 548 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 MAP3K10Q02779 954 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 ARMC9Q7Z3E5 817 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 RIOX2Q8IUF8 465 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 KIAA0319LQ8IZA0 1049 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 SETD4Q9NVD3 440 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 HMGXB4Q9UGU5 601 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 BRWD3Q6RI45 1802 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 TMEM132DQ14C87 1099 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 HIF1AQ16665 826 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 PRAMEF19Q5SWL8 479 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 NPNTQ6UXI9 565 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 BBOF1Q8ND07 529 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 CDT1Q9H211 546 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 LRRC19Q9H756 370 aa16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 PIH1D1Q9NWS0 290 aaKnown RBP16.14■□□□□ 0.17
TMEM55B-207ENST00000557041 COL11A2P13942 1736 aaPredicted RBP16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 SUN1O94901 812 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 ABCD1P33897 745 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 CTCFP49711 727 aaPredicted RBP16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 C3orf62Q6ZUJ4 267 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 ART4Q93070 314 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 FAF2Q96CS3 445 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 ACAP3Q96P50 834 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 GPR25O00155 361 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 HBP1O60381 514 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 CCNG2Q16589 344 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 PTPN20Q4JDL3 420 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 SCUBE3Q8IX30 993 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 PDIK1LQ8N165 341 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 LRRC8CQ8TDW0 803 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 GPR20Q99678 358 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 C12orf65Q9H3J6 166 aaKnown RBP16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 AVENQ9NQS1 362 aaPredicted RBP16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 ADARB2Q9NS39 739 aaKnown RBP16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 SLC12A6Q9UHW9 1150 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 TULP2O00295 520 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 AKAP5P24588 427 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 TFDP3Q5H9I0 405 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 CELF3Q5SZQ8 465 aaKnown RBP16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 ARHGEF18Q6ZSZ5 1173 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 ARMCX2Q7L311 632 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 EXD1Q8NHP7 514 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 OLIG1Q8TAK6 271 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 P3H4Q92791 437 aa16.13■□□□□ 0.17
TMEM55B-207ENST00000557041 CDH16O75309 829 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 STBD1O95210 358 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 APRTP07741 180 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 RPSAP08865 295 aaKnown RBP16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 MMP8P22894 467 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 IL9RQ01113 521 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 SURF1Q15526 300 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 SH3PXD2AQ5TCZ1 1133 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 CYP4X1Q8N118 509 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 NME8Q8N427 588 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 KLHL29Q96CT2 875 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 CPXM1Q96SM3 734 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 FAM129AQ9BZQ8 928 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 DHX35Q9H5Z1 703 aaKnown RBP16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 WHRNQ9P202 907 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 TPX2Q9ULW0 747 aaKnown RBP16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 A8MXQ7 604 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 ACKR2O00590 384 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 PSTPIP1O43586 416 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 ATP2A2P16615 1042 aaKnown RBP16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 ACO1P21399 889 aaKnown RBP16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 HNRNPH1P31943 449 aaKnown RBP16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 MSH2P43246 934 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 OGDHQ02218 1023 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 PTPN11Q06124 597 aaPredicted RBP16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 CCNYQ8ND76 341 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 PPP1R14CQ8TAE6 165 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 CD101Q93033 1021 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 OSMRQ99650 979 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 TRABDQ9H4I3 376 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 RAB6BQ9NRW1 208 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 TMEM51Q9NW97 253 aa16.12■□□□□ 0.17
TMEM55B-207ENST00000557041 MSCO60682 206 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 NDST1P52848 882 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 MYO1EQ12965 1108 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 PIGHQ14442 188 aaPredicted RBP16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 SETDB1Q15047 1291 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 ZPBP2Q6X784 338 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 ANKS1BQ7Z6G8 1248 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 SPATS2Q86XZ4 545 aaKnown RBP16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 TTC17Q96AE7 1141 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 LPIN3Q9BQK8 851 aa16.11■□□□□ 0.17
TMEM55B-207ENST00000557041 CD248Q9HCU0 757 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms