RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 AHSPQ9NZD4 102 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 SNX24Q9Y343 169 aa12.48□□□□□ -0.41
NEK9-210ENST00000557026 PIK3C2BO00750 1634 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 VWA5AO00534 786 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 KCNN4O15554 427 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 CYP26A1O43174 497 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 B3GAT3O94766 335 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 ARSEP51690 589 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 TWF1Q12792 350 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 CNTN1Q12860 1018 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 LRIG3Q6UXM1 1119 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 ADCK2Q7Z695 626 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 OSBPL9Q96SU4 736 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 RUBCNLQ9H714 662 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 SYTL2Q9HCH5 934 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 TBC1D13Q9NVG8 400 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 A0A088AWK7 358 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 RASSF10A6NK89 507 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 PDE2AO00408 941 aaPredicted RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 TRIM66O15016 1216 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 VPS26AO75436 327 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 AP1G2O75843 785 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 AGTP01019 485 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 ZNF10P21506 573 aaPredicted RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 PSEN1P49768 467 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 ARFIP2P53365 341 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 PPP1R16AQ96I34 528 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 ELOVL4Q9GZR5 314 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 SCOCQ9UIL1 159 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 FHOD1Q9Y613 1164 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 MAGEB16A2A368 324 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 PRMT3O60678 531 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 CDH16O75309 829 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 TRIM49P0CI25 452 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 TRIM49CP0CI26 452 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 CUL2Q13617 745 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 BTG3Q14201 252 aaPredicted RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 DEFB115Q30KQ5 88 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 ST13P4Q8IZP2 240 aaPredicted RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 MSL3Q8N5Y2 521 aaKnown RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 SYCE1LA8MT33 242 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 H3BRB1 525 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 ACSL3O95573 720 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 KRT4P19013 534 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 NBPF20Q3BBV1 942 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 LMBRD2Q68DH5 695 aaPredicted RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 ZFP42Q96MM3 310 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 AP1M1Q9BXS5 423 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 TUT1Q9H6E5 874 aaKnown RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 COPS7BQ9H9Q2 264 aaPredicted RBP12.47□□□□□ -0.41
NEK9-210ENST00000557026 ZNF556Q9HAH1 456 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 PXMP2Q9NR77 195 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 STOML1Q9UBI4 398 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 RAD54BQ9Y620 910 aa12.47□□□□□ -0.41
NEK9-210ENST00000557026 EVPLLA8MZ36 301 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 NCAM1P13591 858 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 GUCA1AP43080 201 aaPredicted RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 POLR2LP62875 67 aaKnown RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 ZC3H12BQ5HYM0 836 aaKnown RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 HES6Q96HZ4 224 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 HEMGNQ9BXL5 484 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 E9PCH4 1651 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 MST1RQ04912 1400 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 PPRC1Q5VV67 1664 aaKnown RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 GTPBP10A4D1E9 387 aaKnown RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 TRPC5OSA6NMA1 111 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 C16orf96A6NNT2 1141 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 CYB561D2O14569 222 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 IFNA14P01570 189 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 VCAM1P19320 739 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 NCALDP61601 193 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 OCA2Q04671 838 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 FAM83EQ2M2I3 478 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 SLC27A1Q6PCB7 646 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 TRIM69Q86WT6 500 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.46□□□□□ -0.41
NEK9-210ENST00000557026 ING2Q9H160 280 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 PDE11AQ9HCR9 933 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 BLOC1S6Q9UL45 172 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 LRRIQ1Q96JM4 1722 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 POLRMTO00411 1230 aaKnown RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 GZMAP12544 262 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 UCHL3P15374 230 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 EEF1B2P24534 225 aaKnown RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 CAPZA2P47755 286 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 ACOT2P49753 483 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 LRRC8EQ6NSJ5 796 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 ANO5Q75V66 913 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 ADGRF2Q8IZF7 708 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 SERPINB11Q96P15 392 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 TRMT6Q9UJA5 497 aaKnown RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 PRG3Q9Y2Y8 225 aaPredicted RBP12.46□□□□□ -0.41
NEK9-210ENST00000557026 DYRK1BQ9Y463 629 aa12.46□□□□□ -0.41
NEK9-210ENST00000557026 CFLARO15519 480 aa12.46□□□□□ -0.42
NEK9-210ENST00000557026 KLHL2O95198 593 aa12.46□□□□□ -0.42
NEK9-210ENST00000557026 SKOR1P84550 965 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms