RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 TARS2Q9BW92 718 aaKnown RBP10.12□□□□□ -0.79
SYNE2-224ENST00000557024 SLC46A2Q9BY10 475 aa10.12□□□□□ -0.79
SYNE2-224ENST00000557024 SLC32A1Q9H598 525 aa10.12□□□□□ -0.79
SYNE2-224ENST00000557024 PTPRHQ9HD43 1115 aa10.12□□□□□ -0.79
SYNE2-224ENST00000557024 CCL26Q9Y258 94 aa10.12□□□□□ -0.79
SYNE2-224ENST00000557024 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
SYNE2-224ENST00000557024 ASB3Q9Y575 518 aa10.12□□□□□ -0.79
SYNE2-224ENST00000557024 IGSF10Q6WRI0 2623 aa10.12□□□□□ -0.79
SYNE2-224ENST00000557024 MTMR11A4FU01 709 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 OR6C75A6NL08 312 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 CCDC169A6NNP5 214 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 M0QZQ0 153 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 MCF2P10911 925 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 DRD1P21728 446 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 GJB2P29033 226 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 WEE1P30291 646 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 KRT2P35908 639 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 PSMD2Q13200 908 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 TRIM29Q14134 588 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 MCM6Q14566 821 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 COL28A1Q2UY09 1125 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 FBXO43Q4G163 708 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 SEZ6Q53EL9 994 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 SWT1Q5T5J6 900 aaKnown RBP10.11□□□□□ -0.79
SYNE2-224ENST00000557024 ITIH5Q86UX2 942 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 CMTM8Q8IZV2 173 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 CHCHD4Q8N4Q1 142 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 NSUN7Q8NE18 718 aaKnown RBP10.11□□□□□ -0.79
SYNE2-224ENST00000557024 TSTD1Q8NFU3 115 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 TNFRSF25Q93038 417 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 MTMR9Q96QG7 549 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 SEPT5Q99719 369 aaPredicted RBP10.11□□□□□ -0.79
SYNE2-224ENST00000557024 MRPL4Q9BYD3 311 aaKnown RBP10.11□□□□□ -0.79
SYNE2-224ENST00000557024 TMEM60Q9H2L4 133 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 IL21Q9HBE4 155 aa10.11□□□□□ -0.79
SYNE2-224ENST00000557024 ASH1LQ9NR48 2969 aaKnown RBP10.11□□□□□ -0.79
SYNE2-224ENST00000557024 PDCD11Q14690 1871 aaKnown RBP10.1□□□□□ -0.79
SYNE2-224ENST00000557024 PHLPP2Q6ZVD8 1323 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 JAK2O60674 1132 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 ATF6P18850 670 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 NDUFV2P19404 249 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 PDCP20941 246 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 CDC25CP30307 473 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 NMT1P30419 496 aaKnown RBP10.1□□□□□ -0.79
SYNE2-224ENST00000557024 AMPD2Q01433 879 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 SPAG1Q07617 926 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 ST3GAL1Q11201 340 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 LMAN2Q12907 356 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 BFSP1Q12934 665 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 VEPH1Q14D04 833 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 SLC10A6Q3KNW5 377 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 TRIM61Q5EBN2 209 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 OVOS1Q6IE37 1185 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 ANO7Q6IWH7 933 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 CC2D1AQ6P1N0 951 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-224ENST00000557024 ARMCX6Q7L4S7 300 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 TAS1R3Q7RTX0 852 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 C11orf74Q86VG3 221 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 MAB21L3Q8N8X9 362 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 RIN3Q8TB24 985 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 GIPC2Q8TF65 315 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 KIFAP3Q92845 792 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 USP13Q92995 863 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-224ENST00000557024 ACDQ96AP0 544 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 OXCT2Q9BYC2 517 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-224ENST00000557024 ANKFY1Q9P2R3 1169 aa10.1□□□□□ -0.79
SYNE2-224ENST00000557024 STK36Q9NRP7 1315 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 TCHHQ07283 1943 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 SPAG17Q6Q759 2223 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 H3BQV1 296 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 ABLIM1O14639 778 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 CTDNEP1O95476 244 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 CAPNS1P04632 268 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 ENGP17813 658 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 PROZP22891 400 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 GJA4P35212 333 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 AVPR1AP37288 418 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 NPTX2P47972 431 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 AARSP49588 968 aaKnown RBP eCLIP10.09□□□□□ -0.79
SYNE2-224ENST00000557024 PEX3P56589 373 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 FAM193AP78312 1265 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
SYNE2-224ENST00000557024 MYBPC2Q14324 1141 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 TAF12Q16514 161 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 MGAT5BQ3V5L5 792 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 LARP1BQ659C4 914 aaKnown RBP10.09□□□□□ -0.79
SYNE2-224ENST00000557024 ARMCX5Q6P1M9 558 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 MPZL3Q6UWV2 235 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 DSTYKQ6XUX3 929 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 PIP4P1Q86T03 277 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 TTC30AQ86WT1 665 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 TTC16Q8NEE8 873 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 ZBTB45Q96K62 511 aaPredicted RBP10.09□□□□□ -0.79
SYNE2-224ENST00000557024 NUSAP1Q9BXS6 441 aaKnown RBP10.09□□□□□ -0.79
SYNE2-224ENST00000557024 BRMS1Q9HCU9 246 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 FSCN3Q9NQT6 498 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 EVLQ9UI08 416 aaPredicted RBP10.09□□□□□ -0.79
SYNE2-224ENST00000557024 RABGEF1Q9UJ41 708 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 TBX20Q9UMR3 447 aa10.09□□□□□ -0.79
SYNE2-224ENST00000557024 SMG1Q96Q15 3661 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms