RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SLC4A7Q9Y6M7 1214 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 MYH3P11055 1940 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 SBF2Q86WG5 1849 aa4.95□□□□□ -1.62
SRP54-212ENST00000556992 C4AP0C0L4 1744 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 AK9Q5TCS8 1911 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 A0A087WWV3 80 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 MEIS2O14770 477 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 ZBED4O75132 1171 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 OFD1O75665 1012 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 FBXO21O94952 628 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 KNG1P01042 644 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 CDC25AP30304 524 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 CIITAP33076 1130 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 SREBF1P36956 1147 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 ECE1P42892 770 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 SPAG1Q07617 926 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 CUL4BQ13620 913 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 UBE2SQ16763 222 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 TPD52L1Q16890 204 aaPredicted RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 FILIP1LQ4L180 1135 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 FAM83BQ5T0W9 1011 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 CNNM4Q6P4Q7 775 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 USP17L6PQ6QN14 398 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 RASGRP2Q7LDG7 609 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 APOBEC3FQ8IUX4 373 aaKnown RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 LRRC8AQ8IWT6 810 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 GRAMD1CQ8IYS0 662 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 FUKQ8N0W3 1084 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 SPICE1Q8N0Z3 855 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 KIAA1524Q8TCG1 905 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 NOC3LQ8WTT2 800 aaKnown RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 CHFRQ96EP1 664 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 ZNF503Q96F45 646 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 DHTKD1Q96HY7 919 aaPredicted RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 MBOAT7Q96N66 472 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 ZNF830Q96NB3 372 aaPredicted RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 FEZ1Q99689 392 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 TACO1Q9BSH4 297 aaKnown RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 ANO3Q9BYT9 981 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 XPO4Q9C0E2 1151 aaKnown RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 MAF1Q9H063 256 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 NT5C3AQ9H0P0 336 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 BLZF1Q9H2G9 400 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 RANBP17Q9H2T7 1088 aaKnown RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 SEMA4AQ9H3S1 761 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 AS3MTQ9HBK9 375 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 MAP3K20Q9NYL2 800 aaKnown RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 HACL1Q9UJ83 578 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 ZNF112Q9UJU3 913 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 NFE2L3Q9Y4A8 694 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 TELO2Q9Y4R8 837 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 CTDP1Q9Y5B0 961 aaPredicted RBP4.94□□□□□ -1.62
SRP54-212ENST00000556992 PPP2R3BQ9Y5P8 575 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 TAF1LQ8IZX4 1826 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 NRXN2Q9P2S2 1712 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 ABCB11O95342 1321 aa4.94□□□□□ -1.62
SRP54-212ENST00000556992 BICDL2A1A5D9 508 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 PP2D1A8MPX8 630 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 C19orf81C9J6K1 198 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 PSMA7O14818 248 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 WDR46O15213 610 aaKnown RBP4.93□□□□□ -1.62
SRP54-212ENST00000556992 EDIL3O43854 480 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 RHOBTB3O94955 611 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 TDP2O95551 362 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 FGFR1OPO95684 399 aaKnown RBP4.93□□□□□ -1.62
SRP54-212ENST00000556992 CPP00450 1065 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 ICAM1P05362 532 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 SKILP12757 684 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 ZNF18P17022 549 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 PTGS1P23219 599 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 CCT6AP40227 531 aaKnown RBP4.93□□□□□ -1.62
SRP54-212ENST00000556992 RRADP55042 308 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 SNAP25P60880 206 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 PAK1Q13153 545 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 TESK1Q15569 626 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 SHROOM1Q2M3G4 852 aaPredicted RBP4.93□□□□□ -1.62
SRP54-212ENST00000556992 USH1GQ495M9 461 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 COBLL1Q53SF7 1204 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 PRR16Q569H4 304 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 NAALADL2Q58DX5 795 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 MIIPQ5JXC2 388 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 HYIQ5T013 277 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 FILIP1Q7Z7B0 1213 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 ADSSL1Q8N142 457 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 CCDC150Q8NCX0 1101 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 PHOSPHO1Q8TCT1 267 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 CRYGNQ8WXF5 182 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 STAMQ92783 540 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 HAS1Q92839 578 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 PLIN2Q99541 437 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 SLF1Q9BQI6 1058 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 MMTAG2Q9BU76 263 aaKnown RBP4.93□□□□□ -1.62
SRP54-212ENST00000556992 TRIM9Q9C026 710 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 IKZF4Q9H2S9 585 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 KCNMB3Q9NPA1 279 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 SPTLC3Q9NUV7 552 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 EXOC1Q9NV70 894 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 HOXC10Q9NYD6 342 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 GPRC5DQ9NZD1 345 aa4.93□□□□□ -1.62
SRP54-212ENST00000556992 ARHGAP20Q9P2F6 1191 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms