RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 ALDH1A3P47895 512 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 FXR1P51114 621 aaKnown RBP eCLIP4.3□□□□□ -1.72
FOXN3-213ENST00000556916 CHN2P52757 468 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 ANAPC15P60006 121 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 IGBP1P78318 339 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 BLOC1S1P78537 153 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 KIF23Q02241 960 aaPredicted RBP4.3□□□□□ -1.72
FOXN3-213ENST00000556916 MGAT2Q10469 447 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 RESTQ13127 1097 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 PTPN14Q15678 1187 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 BMT2Q1RMZ1 405 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 AFMIDQ63HM1 303 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 METRNLQ641Q3 311 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 ZNF572Q7Z3I7 529 aaPredicted RBP4.3□□□□□ -1.72
FOXN3-213ENST00000556916 CERS3Q8IU89 383 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 RAVER1Q8IY67 606 aaKnown RBP4.3□□□□□ -1.72
FOXN3-213ENST00000556916 DRC7Q8IY82 874 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 BOLLQ8N9W6 283 aaKnown RBP4.3□□□□□ -1.72
FOXN3-213ENST00000556916 SPC24Q8NBT2 197 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 SIMC1Q8NDZ2 872 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.3□□□□□ -1.72
FOXN3-213ENST00000556916 ZFP28Q8NHY6 868 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 KAT5Q92993 513 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 COA7Q96BR5 231 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 TMX3Q96JJ7 454 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 C16orf45Q96MC5 204 aaPredicted RBP4.3□□□□□ -1.72
FOXN3-213ENST00000556916 NCAPGQ9BPX3 1015 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 FUCA2Q9BTY2 467 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 BCO1Q9HAY6 547 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 ZBTB21Q9ULJ3 1066 aa4.3□□□□□ -1.72
FOXN3-213ENST00000556916 PTCH1Q13635 1447 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 SSH2Q76I76 1423 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 NSD2O96028 1365 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 RPAP1Q9BWH6 1393 aaPredicted RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 PREX1Q8TCU6 1659 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 MYO1CO00159 1063 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 HTRA2O43464 458 aaPredicted RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 EPB41L2O43491 1005 aaKnown RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 CDKL5O76039 1030 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 CAVIN2O95810 425 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 IVLP07476 585 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 PDGFRBP09619 1106 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 EGR2P11161 476 aaPredicted RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 CCND1P24385 295 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 FLT3LGP49771 235 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 RAP2BP61225 183 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 RBM6P78332 1123 aaKnown RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 MXRA7P84157 204 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 DHX8Q14562 1220 aaKnown RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 FBXO38Q6PIJ6 1188 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 KRBA2Q6ZNG9 492 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 PDZD4Q76G19 769 aaPredicted RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 CCDC186Q7Z3E2 898 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 RHOT1Q8IXI2 618 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 IQUBQ8NA54 791 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 MNS1Q8NEH6 495 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 OR56A1Q8NGH5 318 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 GOLGA5Q8TBA6 731 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 PAWRQ96IZ0 340 aaKnown RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 PHACTR3Q96KR7 559 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 SENP6Q9GZR1 1112 aaPredicted RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 DCTPP1Q9H773 170 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 PSD3Q9NYI0 1048 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 RNF181Q9P0P0 153 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 SLC23A1Q9UHI7 598 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 RUVBL1Q9Y265 456 aaKnown RBP4.29□□□□□ -1.72
FOXN3-213ENST00000556916 IPPQ9Y573 584 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 RGS12O14924 1447 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 FAM135BQ49AJ0 1406 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 MROH2AA6NES4 1674 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 MYH8P13535 1937 aa4.29□□□□□ -1.72
FOXN3-213ENST00000556916 RTL1A6NKG5 1358 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 DEPDC5O75140 1603 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 CDC42BPGQ6DT37 1551 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 PTPRCP08575 1304 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 LOC102724159A0A0B4J2E5 919 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 CCDC154A6NI56 674 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 KIF1CO43896 1103 aaKnown RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 PRSS23O95084 383 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ESRRBO95718 433 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 CFIP05156 583 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 CCDC172P0C7W6 258 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 RAP2AP10114 183 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 H2AFXP16104 143 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ZNF75DP51815 510 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ATXN1P54253 815 aaKnown RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 EXOSC10Q01780 885 aaKnown RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 TARDBPQ13148 414 aaKnown RBP eCLIP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 MPP3Q13368 585 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 PWP2Q15269 919 aaKnown RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ZSCAN26Q16670 478 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 TTC31Q49AM3 519 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 FAM47AQ5JRC9 791 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ATXN7L2Q5T6C5 722 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 AGAP9Q5VTM2 703 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 EFCAB2Q5VUJ9 269 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ZSCAN25Q6NSZ9 544 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 TMCO3Q6UWJ1 677 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 SYT10Q6XYQ8 523 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms