RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 EGFP01133 1207 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 F11P03951 625 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 HMGA1P17096 107 aaKnown RBP17.02■□□□□ 0.32
RCCD1-207ENST00000556774 UBA7P41226 1012 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 RAP1GAPP47736 663 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 LIMK1P53667 647 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 GTF2BQ00403 316 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 KARSQ15046 597 aaKnown RBP17.02■□□□□ 0.32
RCCD1-207ENST00000556774 TXNDC8Q6A555 127 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 RASSF8Q8NHQ8 419 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 DDX1Q92499 740 aaKnown RBP17.02■□□□□ 0.32
RCCD1-207ENST00000556774 LOXL4Q96JB6 756 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 HHIPQ96QV1 700 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 PI4K2AQ9BTU6 479 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 TMLHEQ9NVH6 421 aa17.02■□□□□ 0.32
RCCD1-207ENST00000556774 AGO2Q9UKV8 859 aaKnown RBP17.02■□□□□ 0.32
RCCD1-207ENST00000556774 MAGED2Q9UNF1 606 aaPredicted RBP17.02■□□□□ 0.32
RCCD1-207ENST00000556774 H3BQV1 296 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 TRDMT1O14717 391 aaKnown RBP17.01■□□□□ 0.31
RCCD1-207ENST00000556774 ZNF806P0C7X5 589 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 DDX6P26196 483 aaKnown RBP eCLIP17.01■□□□□ 0.316e-8■□□□□ 9.2
RCCD1-207ENST00000556774 GRIN1Q05586 938 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 SMARCB1Q12824 385 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 SV2CQ496J9 727 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 SDHAF4Q5VUM1 108 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 DCP1BQ8IZD4 617 aaKnown RBP17.01■□□□□ 0.31
RCCD1-207ENST00000556774 KIF9Q9HAQ2 790 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 FBRSL1Q9HCM7 1045 aaKnown RBP17.01■□□□□ 0.31
RCCD1-207ENST00000556774 TDP1Q9NUW8 608 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 ZMYM5Q9UJ78 669 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 PCDHB5Q9Y5E4 795 aa17.01■□□□□ 0.31
RCCD1-207ENST00000556774 CCDC163A0A0D9SF12 145 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 KPNA7A9QM74 516 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 ATG13O75143 517 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 PRPF40AO75400 957 aaKnown RBP17■□□□□ 0.31
RCCD1-207ENST00000556774 TADA3O75528 432 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 GJB2P29033 226 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 TSPY1Q01534 308 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 N4BP2L1Q5TBK1 243 aaPredicted RBP17■□□□□ 0.31
RCCD1-207ENST00000556774 STPG1Q5TH74 334 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 CRELD2Q6UXH1 353 aaPredicted RBP17■□□□□ 0.31
RCCD1-207ENST00000556774 TTC16Q8NEE8 873 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 LARP4BQ92615 738 aaKnown RBP17■□□□□ 0.31
RCCD1-207ENST00000556774 NUP205Q92621 2012 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 MRPS31Q92665 395 aaKnown RBP17■□□□□ 0.31
RCCD1-207ENST00000556774 ZNF560Q96MR9 790 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 ANGPTL2Q9UKU9 493 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 FRYQ5TBA9 3013 aa17■□□□□ 0.31
RCCD1-207ENST00000556774 TULP1O00294 542 aaPredicted RBP16.99■□□□□ 0.31
RCCD1-207ENST00000556774 TM4SF5O14894 197 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 PMLP29590 882 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 ABCD1P33897 745 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 MPLP40238 635 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 WNT7BP56706 349 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 PLA2G2CQ5R387 149 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 SLFN12LQ6IEE8 588 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 CC2D1AQ6P1N0 951 aaPredicted RBP16.99■□□□□ 0.31
RCCD1-207ENST00000556774 MON1AQ86VX9 555 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 SFR1Q86XK3 245 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 POMGNT1Q8WZA1 660 aa16.99■□□□□ 0.31
RCCD1-207ENST00000556774 AKAP3O75969 853 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 CSH1P0DML2 217 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 CSH2P0DML3 217 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 ACAT1P24752 427 aaKnown RBP16.98■□□□□ 0.31
RCCD1-207ENST00000556774 POLR2BP30876 1174 aaKnown RBP16.98■□□□□ 0.31
RCCD1-207ENST00000556774 LONP1P36776 959 aaKnown RBP16.98■□□□□ 0.31
RCCD1-207ENST00000556774 GALK1P51570 392 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 PDGFRLQ15198 375 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 DDR2Q16832 855 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 CCDC142Q17RM4 750 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 TCEAL6Q6IPX3 200 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 PDCL2Q8N4E4 241 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 RPLP0P6Q8NHW5 317 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 TCEAL3Q969E4 200 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 FAM84AQ96KN4 292 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 P2RY13Q9BPV8 354 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 ST6GALNAC4Q9H4F1 302 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 TRPC7Q9HCX4 862 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 L1RE1Q9UN81 338 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 PCDHGA5Q9Y5G8 931 aa16.98■□□□□ 0.31
RCCD1-207ENST00000556774 DCLK1O15075 740 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 IL18RAPO95256 599 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 DRD1P21728 446 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 CYP2F1P24903 491 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 ADSSP30520 456 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 GJA4P35212 333 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 TFAMQ00059 246 aaKnown RBP16.97■□□□□ 0.31
RCCD1-207ENST00000556774 AMPD2Q01433 879 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 USP4Q13107 963 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 ZNF268Q14587 947 aaPredicted RBP16.97■□□□□ 0.31
RCCD1-207ENST00000556774 MTF1Q14872 753 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 NFE2Q16621 373 aaPredicted RBP16.97■□□□□ 0.31
RCCD1-207ENST00000556774 PLK5Q496M5 336 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 DYMQ7RTS9 669 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 CPA6Q8N4T0 437 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 CAMKK1Q8N5S9 505 aa16.97■□□□□ 0.31
RCCD1-207ENST00000556774 KRI1Q8N9T8 703 aaKnown RBP16.97■□□□□ 0.31
RCCD1-207ENST00000556774 ZSWIM2Q8NEG5 633 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms