RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 HSPBP1Q9NZL4 362 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 MRPS17Q9Y2R5 130 aaKnown RBP7.88□□□□□ -1.15
SCFD1-222ENST00000556768 TECTAO75443 2155 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 GOLGA6L4A6NEF3 574 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 H0Y858 1186 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PPEF2O14830 753 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 CLSTN1O94985 981 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 OR4Q2P0C623 313 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 DLATP10515 647 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PCSK1P29120 753 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 LHX1P48742 406 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PRKCQQ04759 706 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SNW1Q13573 536 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SNRNP35Q16560 246 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SLC44A4Q53GD3 710 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 WSCD1Q658N2 575 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 DNAJB7Q7Z6W7 309 aaPredicted RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ALYREFQ86V81 257 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 YAF2Q8IY57 180 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 EFCAB13Q8IY85 973 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 TMEM105Q8N8V8 129 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 XXYLT1Q8NBI6 393 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ST13P5Q8NFI4 369 aaPredicted RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SMARCD2Q92925 531 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 IRF7Q92985 503 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 THAP11Q96EK4 314 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ZFRQ96KR1 1074 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 NELL2Q99435 816 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 KXD1Q9BQD3 176 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 TRMT61BQ9BVS5 477 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 BLZF1Q9H2G9 400 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 IKZF4Q9H2S9 585 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 BRD9Q9H8M2 597 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PDE11AQ9HCR9 933 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SCUBE2Q9NQ36 999 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 DNAAF2Q9NVR5 837 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 CEP72Q9P209 647 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 EGFL7Q9UHF1 273 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ZMYM5Q9UJ78 669 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 YIPF1Q9Y548 306 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PCDHB9Q9Y5E1 797 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PCDHB5Q9Y5E4 795 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SNX9Q9Y5X1 595 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 UBE4BO95155 1302 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ZFHX2Q9C0A1 2572 aaPredicted RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 MTMR11A4FU01 709 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SNPHO15079 494 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 EXOC3O60645 756 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 CEBPBP17676 345 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PSMC3P17980 439 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SYKP43405 635 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 MRE11P49959 708 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ATP1A2P50993 1020 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 CYP2J2P51589 502 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 BFSP1Q12934 665 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 TRPC3Q13507 836 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PKP1Q13835 747 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 KNOP1Q1ED39 458 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SLC5A9Q2M3M2 681 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ZNF852Q6ZMS4 543 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 DPH6Q7L8W6 267 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 WDR49Q8IV35 697 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 NELFCDQ8IXH7 590 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 C1orf127Q8N9H9 656 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PRSS33Q8NF86 280 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SPATA18Q8TC71 538 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 HPS3Q969F9 1004 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 PSMG2Q969U7 264 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 HPDLQ96IR7 371 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 MMS19Q96T76 1030 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ACBD6Q9BR61 282 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 RPP25Q9BUL9 199 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 BCO2Q9BYV7 579 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 MTMR12Q9C0I1 747 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ZCWPW1Q9H0M4 648 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ATXN3LQ9H3M9 355 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 TBC1D17Q9HA65 648 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 SLC39A2Q9NP94 309 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 AGPAT3Q9NRZ7 376 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 INTS13Q9NVM9 706 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 GDAP2Q9NXN4 497 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 DDX43Q9NXZ2 648 aaKnown RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ABI2Q9NYB9 513 aaPredicted RBP7.87□□□□□ -1.15
SCFD1-222ENST00000556768 FRYLO94915 3013 aa7.87□□□□□ -1.15
SCFD1-222ENST00000556768 ATG2AQ2TAZ0 1938 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 A0A1B0GVL5 298 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 A0A1W2PRU2 124 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 KANSL1LA0AUZ9 987 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 KRBA1A5PL33 1030 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 MAN2B1O00754 1011 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 PHACTR2O75167 634 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 VAMP1P23763 118 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 CDC25CP30307 473 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 CTHP32929 405 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 EPHA5P54756 1037 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 STARD6P59095 220 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 RPL10AP62906 217 aaKnown RBP7.86□□□□□ -1.15
SCFD1-222ENST00000556768 TCF15Q12870 199 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 CUL4BQ13620 913 aa7.86□□□□□ -1.15
SCFD1-222ENST00000556768 MAPRE1Q15691 268 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms