RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 RNF225M0QZC1 329 aaPredicted RBP11.98□□□□□ -0.49
FOXN3-212ENST00000556541 MED7O43513 233 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 ABLIM3O94929 683 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 CLSTN1O94985 981 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 PAPLNO95428 1278 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 PTPN1P18031 435 aaKnown RBP11.98□□□□□ -0.49
FOXN3-212ENST00000556541 CD58P19256 250 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 LMO2P25791 158 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 CDH5P33151 784 aaPredicted RBP11.98□□□□□ -0.49
FOXN3-212ENST00000556541 MAGEA11P43364 429 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 CCDC173Q0VFZ6 552 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 CAMK1Q14012 370 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 PTPROQ16827 1216 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
FOXN3-212ENST00000556541 SGO2Q562F6 1265 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 PPP1R2P3Q6NXS1 205 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 LCLAT1Q6UWP7 414 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 TRIM72Q6ZMU5 477 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 C4orf50Q6ZRC1 276 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 OR10T2Q8NGX3 314 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 SPPL2BQ8TCT7 592 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 EPS8L1Q8TE68 723 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 TWNKQ96RR1 684 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 CDCA3Q99618 268 aaPredicted RBP11.98□□□□□ -0.49
FOXN3-212ENST00000556541 HNRNPABQ99729 332 aaKnown RBP11.98□□□□□ -0.49
FOXN3-212ENST00000556541 EMILIN2Q9BXX0 1053 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 ZNF576Q9H609 170 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 PNPLA8Q9NP80 782 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 HMGXB4Q9UGU5 601 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 NOCTQ9UK39 431 aaKnown RBP11.98□□□□□ -0.49
FOXN3-212ENST00000556541 MYH10P35580 1976 aa11.98□□□□□ -0.49
FOXN3-212ENST00000556541 PLXNA3P51805 1871 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CHD9Q3L8U1 2897 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 C2orf71A6NGG8 1288 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 O00370 1275 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 GRM6O15303 877 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CYP26A1O43174 497 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 LSM8O95777 96 aaKnown RBP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 SERPING1P05155 500 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 ADH1AP07327 375 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 SETSIPP0DME0 302 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 KRT5P13647 590 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CYP11B1P15538 503 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 DNAJB1P25685 340 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 GNA15P30679 374 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 PDE6CP51160 858 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CDR2Q01850 454 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 ASIC2Q16515 512 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 PTPN21Q16825 1174 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 PKDCCQ504Y2 493 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 HGSNATQ68CP4 663 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 VSTM1Q6UX27 236 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 TMC7Q7Z402 723 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CEP57Q86XR8 500 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 ZNF461Q8TAF7 563 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 ZNF606Q8WXB4 792 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 DDX1Q92499 740 aaKnown RBP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 ELMO3Q96BJ8 720 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 MRPL38Q96DV4 380 aaKnown RBP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 TCF25Q9BQ70 676 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CLSTN3Q9BQT9 956 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 UBXN6Q9BZV1 441 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 ZNF518BQ9C0D4 1074 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 LHX5Q9H2C1 402 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CSNK1G1Q9HCP0 422 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 ALG13Q9NP73 1137 aaKnown RBP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CRTAC1Q9NQ79 661 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 CYLDQ9NQC7 956 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 ZNHIT6Q9NWK9 470 aaKnown RBP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 AFF4Q9UHB7 1163 aaKnown RBP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 TIMM13Q9Y5L4 95 aaPredicted RBP11.97□□□□□ -0.49
FOXN3-212ENST00000556541 GREB1Q4ZG55 1949 aa11.97□□□□□ -0.49
FOXN3-212ENST00000556541 LPXNO60711 386 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 CXCL14O95715 111 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 POU2F2P09086 479 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 ATF2P15336 505 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 RPL34P49207 117 aaKnown RBP11.96□□□□□ -0.49
FOXN3-212ENST00000556541 ERVFC1P60507 584 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 ROR1Q01973 937 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 KLHL30Q0D2K2 578 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 E4F1Q66K89 784 aaPredicted RBP11.96□□□□□ -0.49
FOXN3-212ENST00000556541 LILRA6Q6PI73 481 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 WDR59Q6PJI9 974 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 PRSS55Q6UWB4 352 aaPredicted RBP11.96□□□□□ -0.49
FOXN3-212ENST00000556541 SPRED2Q7Z698 418 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 ACOT1Q86TX2 421 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 ANKRD52Q8NB46 1076 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 CCDC112Q8NEF3 446 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 STK32AQ8WU08 396 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 PPP2R3CQ969Q6 453 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 SMARCD1Q96GM5 515 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 HEXIM2Q96MH2 286 aaKnown RBP11.96□□□□□ -0.49
FOXN3-212ENST00000556541 KLHL5Q96PQ7 755 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 ENTPD7Q9NQZ7 604 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 DPP7Q9UHL4 492 aa11.96□□□□□ -0.49
FOXN3-212ENST00000556541 MYO9BQ13459 2157 aa11.95□□□□□ -0.5
FOXN3-212ENST00000556541 TRANK1O15050 2925 aa11.95□□□□□ -0.5
FOXN3-212ENST00000556541 WDR27A2RRH5 827 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms