RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MAP4K1Q92918 833 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 PPM1MQ96MI6 270 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 EIF2AK1Q9BQI3 630 aaKnown RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 NYXQ9GZU5 481 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 CNNM1Q9NRU3 951 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 PAG1Q9NWQ8 432 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 FNIP2Q9P278 1114 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 SAP30BPQ9UHR5 308 aaKnown RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 NHSQ6T4R5 1651 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 A0A1B0GVC2 190 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 TLR5O60602 858 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 CDC14BO60729 498 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 RAD17O75943 681 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 FAM200BP0CF97 657 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 CCND1P24385 295 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 IGHMBP2P38935 993 aaKnown RBP5.79□□□□□ -1.48
SRP54-211ENST00000556445 IARSP41252 1262 aaKnown RBP5.79□□□□□ -1.48
SRP54-211ENST00000556445 TM4SF4P48230 202 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 ANTXR2P58335 489 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 ZBED6P86452 979 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 ITPK1Q13572 414 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 CUL4AQ13619 759 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 PUM1Q14671 1186 aaKnown RBP eCLIP5.79□□□□□ -1.48
SRP54-211ENST00000556445 NECTIN1Q15223 517 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 ATP2B3Q16720 1220 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 MCMDC2Q4G0Z9 681 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 ATP13A4Q4VNC1 1196 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 LRRC24Q50LG9 513 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 SPECC1Q5M775 1068 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 TTC38Q5R3I4 469 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 VPS53Q5VIR6 699 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 CLEC17AQ6ZS10 378 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 NXPE1Q8N323 547 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 NKAIN3Q8N8D7 197 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 SPATA5Q8NB90 893 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 NAXEQ8NCW5 288 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 OR14K1Q8NGZ2 314 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 RSPH1Q8WYR4 309 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 NELL2Q99435 816 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 MPHOSPH8Q99549 860 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 DEF6Q9H4E7 631 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 ZMAT4Q9H898 229 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 KIAA1586Q9HCI6 787 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 C1orf112Q9NSG2 853 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 CTNNA3Q9UI47 895 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 MAGEL2Q9UJ55 1249 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 NIP7Q9Y221 180 aaKnown RBP eCLIP5.79□□□□□ -1.48
SRP54-211ENST00000556445 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.79□□□□□ -1.48
SRP54-211ENST00000556445 SNX14Q9Y5W7 946 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 CYP46A1Q9Y6A2 500 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 SLC30A1Q9Y6M5 507 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 LAMB2P55268 1798 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 BCORQ6W2J9 1755 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 ATRNO75882 1429 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 MED23Q9ULK4 1368 aa5.79□□□□□ -1.48
SRP54-211ENST00000556445 AFF2P51816 1311 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 UBN2Q6ZU65 1347 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 MATN3O15232 486 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 RNF113AO15541 343 aaKnown RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 FRAT2O75474 233 aaPredicted RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 PDE8BO95263 885 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 HSD3B1P14060 373 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 RHCEP18577 417 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 TNFRSF1AP19438 455 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 ERVK-21P61565 698 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 TIMM10P62072 90 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 RHDQ02161 417 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 TRIM14Q14142 442 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 PCBP2Q15366 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
SRP54-211ENST00000556445 SUSD4Q5VX71 490 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 B3GNT9Q6UX72 402 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 KANSL1Q7Z3B3 1105 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 MYLK4Q86YV6 388 aaPredicted RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 SLC41A1Q8IVJ1 513 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 CMTR2Q8IYT2 770 aaKnown RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 ACRBPQ8NEB7 543 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 CHTF18Q8WVB6 975 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 LPIN2Q92539 896 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 TMX3Q96JJ7 454 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 SGCZQ96LD1 299 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 LRGUKQ96M69 825 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 NUP88Q99567 741 aaPredicted RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 PUS3Q9BZE2 481 aaKnown RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 HAPLN2Q9GZV7 340 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 GREM2Q9H772 168 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 MSL2Q9HCI7 577 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 KMT5AQ9NQR1 393 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 PDRG1Q9NUG6 133 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 NARFQ9UHQ1 456 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 CCNL1Q9UK58 526 aaPredicted RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 ACAD8Q9UKU7 415 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 LIMCH1Q9UPQ0 1083 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 ZKSCAN5Q9Y2L8 839 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 GPR52Q9Y2T5 361 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 VWA7Q9Y334 891 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 TCAF1Q9Y4C2 921 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 RBM8AQ9Y5S9 174 aaKnown RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 MYH14Q7Z406 1995 aaKnown RBP5.78□□□□□ -1.48
SRP54-211ENST00000556445 BTAF1O14981 1849 aa5.78□□□□□ -1.48
SRP54-211ENST00000556445 A0A0D9SFI3 127 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms