RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 FGF19O95750 216 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 SRFP11831 508 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 MYL4P12829 197 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 CCNE1P24864 410 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 FKBP3Q00688 224 aaKnown RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 ZNF667Q5HYK9 610 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 PARM1Q6UWI2 310 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 C4orf50Q6ZRC1 276 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 DNAJB7Q7Z6W7 309 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 SPATA2LQ8IUW3 424 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 SLC44A3Q8N4M1 653 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 SHKBP1Q8TBC3 707 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 FAM200AQ8TCP9 573 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 TAF4BQ92750 862 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 DHTKD1Q96HY7 919 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 LPIN3Q9BQK8 851 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 MRPL45Q9BRJ2 306 aaKnown RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 NXF1Q9UBU9 619 aaKnown RBP12.33□□□□□ -0.44
SLIRP-206ENST00000556375 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 MUC6Q6W4X9 2439 aa12.33□□□□□ -0.44
SLIRP-206ENST00000556375 MYBPHLA2RUH7 354 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 NRG2O14511 850 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-206ENST00000556375 NARSO43776 548 aaKnown RBP12.32□□□□□ -0.44
SLIRP-206ENST00000556375 HLA-DRAP01903 254 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 P4HA1P13674 534 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 BMP6P22004 513 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 LMO2P25791 158 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 GTF2H1P32780 548 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 GNL1P36915 607 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-206ENST00000556375 MAGEA11P43364 429 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 GCLMP48507 274 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 CDR1P51861 262 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
SLIRP-206ENST00000556375 RPL10AP62906 217 aaKnown RBP12.32□□□□□ -0.44
SLIRP-206ENST00000556375 PPP3CAQ08209 521 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 MORC3Q14149 939 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 SGSM1Q2NKQ1 1148 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 ANKRD40Q6AI12 368 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 FOXR2Q6PJQ5 311 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 SCARA5Q6ZMJ2 495 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 OR6B3Q8NGW1 331 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 MYLPFQ96A32 169 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 MCRS1Q96EZ8 462 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 EEF2KMTQ96G04 330 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 IMPG2Q9BZV3 1241 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 SMYD3Q9H7B4 428 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 TMEM8AQ9HCN3 771 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 ZNF334Q9HCZ1 680 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-206ENST00000556375 CRTAC1Q9NQ79 661 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 NME7Q9Y5B8 376 aa12.32□□□□□ -0.44
SLIRP-206ENST00000556375 ZNF638Q14966 1978 aaKnown RBP12.31□□□□□ -0.44
SLIRP-206ENST00000556375 A0A1W2PRU2 124 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 STX10O60499 249 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 ATP2C2O75185 946 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 ECI2O75521 394 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
SLIRP-206ENST00000556375 GJA1P17302 382 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 COL9A1P20849 921 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 FCARP24071 287 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 CYP2F1P24903 491 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 GABRR2P28476 465 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 CDC25CP30307 473 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 MXI1P50539 228 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
SLIRP-206ENST00000556375 TEAD2Q15562 447 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 TAF12Q16514 161 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 POTEHQ6S545 545 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 VSTM1Q6UX27 236 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 GAREM2Q75VX8 874 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
SLIRP-206ENST00000556375 FBXL6Q8N531 539 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 GIPC2Q8TF65 315 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 PBXIP1Q96AQ6 731 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 ASB16Q96NS5 453 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 GCNAQ96QF7 691 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 KXD1Q9BQD3 176 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 GPR88Q9GZN0 384 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 SLC2A4RGQ9NR83 387 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 HCN4Q9Y3Q4 1203 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 KIF26AQ9ULI4 1882 aaPredicted RBP12.31□□□□□ -0.44
SLIRP-206ENST00000556375 COL4A2P08572 1712 aa12.31□□□□□ -0.44
SLIRP-206ENST00000556375 PATJQ8NI35 1801 aa12.3□□□□□ -0.44
SLIRP-206ENST00000556375 BICDL2A1A5D9 508 aa12.3□□□□□ -0.44
SLIRP-206ENST00000556375 A8MXQ7 604 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms