RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 DNM1LO00429 736 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 VWA5AO00534 786 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 SCDO00767 359 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 KLF4O43474 513 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 RAMP2O60895 175 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 CDC45O75419 566 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 PGK1P00558 417 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 AMY2AP04746 511 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 ZFYP08048 801 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 MMEP08473 750 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 HOXC6P09630 235 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 TSPY3P0CV98 308 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 TSPY8P0CW00 308 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 AMY2BP19961 511 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 MCM2P49736 904 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 NUCB2P80303 420 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 KLRC3Q07444 240 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 SSRP1Q08945 709 aaKnown RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 TMEM132BQ14DG7 1078 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 RABEP1Q15276 862 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 LRRC41Q15345 812 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 LRIT3Q3SXY7 679 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 MTERF2Q49AM1 385 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 KIAA1755Q5JYT7 1200 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 SNRNP48Q6IEG0 339 aaKnown RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 CASC1Q6TDU7 716 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 LRSAM1Q6UWE0 723 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 C16orf59Q7L2K0 433 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 ANKRD35Q8N283 1001 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 CISD2Q8N5K1 135 aaKnown RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 PRPF38AQ8NAV1 312 aaKnown RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 TRPV1Q8NER1 839 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 PCDH19Q8TAB3 1148 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 CALML6Q8TD86 181 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 CHURC1Q8WUH1 139 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 CFHR4Q92496 578 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 BADQ92934 168 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 MAML3Q96JK9 1138 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 STRBPQ96SI9 672 aaKnown RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 NUP88Q99567 741 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 SLF1Q9BQI6 1058 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 FSD1Q9BTV5 496 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 NAPBQ9H115 298 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 PRO3102Q9H379 93 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 DCTPP1Q9H773 170 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 XPNPEP3Q9NQH7 507 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 TOMM22Q9NS69 142 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 FBXO28Q9NVF7 368 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 ARPP21Q9UBL0 812 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 FEM1BQ9UK73 627 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 ZHX1Q9UKY1 873 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-240ENST00000556339 ALPK3Q96L96 1907 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 PLXNB2O15031 1838 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 SIPA1L1O43166 1804 aa4.56□□□□□ -1.68
ATXN3-240ENST00000556339 DDX60LQ5H9U9 1706 aaKnown RBP4.55□□□□□ -1.68
ATXN3-240ENST00000556339 MYH7P12883 1935 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 GSG1L2A8MUP6 293 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 WNT9AO14904 365 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 GPAA1O43292 621 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 PQBP1O60828 265 aaKnown RBP4.55□□□□□ -1.68
ATXN3-240ENST00000556339 CLASP2O75122 1294 aaKnown RBP4.55□□□□□ -1.68
ATXN3-240ENST00000556339 PRDM1O75626 825 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 TTLL1O95922 423 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 C4BPAP04003 597 aaKnown RBP4.55□□□□□ -1.68
ATXN3-240ENST00000556339 CYBAP13498 195 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 AKR1A1P14550 325 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 TGM1P22735 817 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 TFAP4Q01664 338 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 TLE2Q04725 743 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 RAB33AQ14088 237 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 SHHQ15465 462 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 STILQ15468 1287 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 TRIM60Q495X7 471 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 SBK1Q52WX2 424 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 FAM47AQ5JRC9 791 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 ANKRD45Q5TZF3 282 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 TSHZ3Q63HK5 1081 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 TMEM200BQ69YZ2 307 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 GIMAP6Q6P9H5 292 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 CKAP2LQ8IYA6 745 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 GPR135Q8IZ08 494 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 KBTBD3Q8NAB2 608 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 NUP133Q8WUM0 1156 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 LARP4BQ92615 738 aaKnown RBP4.55□□□□□ -1.68
ATXN3-240ENST00000556339 APPBP2Q92624 585 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 ERCC4Q92889 916 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-240ENST00000556339 TEX13BQ9BXU2 312 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 SLKQ9H2G2 1235 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-240ENST00000556339 RAVER2Q9HCJ3 691 aaKnown RBP4.55□□□□□ -1.68
ATXN3-240ENST00000556339 SLC2A4RGQ9NR83 387 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 HOMER2Q9NSB8 354 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 MTMR10Q9NXD2 777 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 NYAP2Q9P242 653 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 PFDN2Q9UHV9 154 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 NRBP1Q9UHY1 535 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 PCDHA9Q9Y5H5 950 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 MAST2Q6P0Q8 1798 aa4.55□□□□□ -1.68
ATXN3-240ENST00000556339 MCM3APO60318 1980 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 CUL9Q8IWT3 2517 aa4.54□□□□□ -1.68
ATXN3-240ENST00000556339 MYH4Q9Y623 1939 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms