RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 MAPK8IP2Q13387 824 aaPredicted RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 MAPRE1Q15691 268 aaKnown RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 DUOXA2Q1HG44 320 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 ITPRIPL2Q3MIP1 535 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 INTS6LQ5JSJ4 861 aaKnown RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 FAM171BQ6P995 826 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 MON1AQ86VX9 555 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 PDCL2Q8N4E4 241 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 CSGALNACT2Q8N6G5 542 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 IQUBQ8NA54 791 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 TMEM174Q8WUU8 243 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 RSPRY1Q96DX4 576 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 TRMT2BQ96GJ1 504 aaKnown RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 ANKRD36BP1Q96IX9 119 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 LRRC3BQ96PB8 259 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 SEPT5Q99719 369 aaPredicted RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 MAGEF1Q9HAY2 307 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 INTS13Q9NVM9 706 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 RBAKQ9NYW8 714 aaPredicted RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 EHD2Q9NZN4 543 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 NDRG2Q9UN36 371 aaKnown RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 GPR179Q6PRD1 2367 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 DCHS1Q96JQ0 3298 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 SCN1AP35498 2009 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 PVALEFA0A1B0GWK0 134 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 TRDMT1O14717 391 aaKnown RBP8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 CUTAO60888 179 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 NOL4O94818 638 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 PRPF6O94906 941 aaKnown RBP8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 ITGB3P05106 788 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 RETP07949 1114 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 TMEM191BP0C7N4 346 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 POLR2BP30876 1174 aaKnown RBP8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 PPP3CCP48454 512 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 PDE6CP51160 858 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 CEBPZQ03701 1054 aaKnown RBP8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 RUNX3Q13761 415 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 CCINQ13939 588 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 GAS6Q14393 721 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 PDGFRLQ15198 375 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 STK38Q15208 465 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 E2F4Q16254 413 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 FBXO43Q4G163 708 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 FAM173BQ6P4H8 233 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 VSTM1Q6UX27 236 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 C4orf50Q6ZRC1 276 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 TMEM150AQ86TG1 271 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 LONP2Q86WA8 852 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 KIAA2013Q8IYS2 634 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 TMEM130Q8N3G9 435 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 TTC9BQ8N6N2 239 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 FSIP1Q8NA03 581 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 CCDC26Q8TAB7 109 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 MRPS31Q92665 395 aaKnown RBP8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 RMDN1Q96DB5 314 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 SPATA17Q96L03 361 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 PKMYT1Q99640 499 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 C7orf25Q9BPX7 421 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 HINFPQ9BQA5 517 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 LPIN3Q9BQK8 851 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 CBWD1Q9BRT8 395 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 PANK2Q9BZ23 570 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 TRIM9Q9C026 710 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 GKN1Q9NS71 199 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 TDP1Q9NUW8 608 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 DDX43Q9NXZ2 648 aaKnown RBP8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 ABI2Q9NYB9 513 aaPredicted RBP8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 TBC1D7Q9P0N9 293 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 NCDNQ9UBB6 729 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 GMEB2Q9UKD1 530 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 CDH9Q9ULB4 789 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 RAB23Q9ULC3 237 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 L1RE1Q9UN81 338 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 ZNF292O60281 2723 aa8.36□□□□□ -1.07
PTCSC3-201ENST00000556013 NCANO14594 1321 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 UBE4BO95155 1302 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 A0A087X0B3 334 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 CHURC1-FNTBB4DL54 471 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 K7ESF4 209 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 TACC1O75410 805 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 SOAT2O75908 522 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 STAU1O95793 577 aaKnown RBP8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 TNNC2P02585 160 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 DRD1P21728 446 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 TGM1P22735 817 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 CASP5P51878 434 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 LMNB2Q03252 620 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 FAM160A1Q05DH4 1040 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 EHHADHQ08426 723 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 GRSF1Q12849 480 aaKnown RBP eCLIP8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 BFSP1Q12934 665 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 SOWAHAQ2M3V2 549 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 TMEM196Q5HYL7 178 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 STXBP5Q5T5C0 1151 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 LAIR1Q6GTX8 287 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 CC2D1AQ6P1N0 951 aaPredicted RBP8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 TSSK4Q6SA08 328 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 UNC13DQ70J99 1090 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 EPM2AIP1Q7L775 607 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms