RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 HMGA1P17096 107 aaKnown RBP12.37□□□□□ -0.43
LRP1-209ENST00000555941 PCSK1P29120 753 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 AVPR1AP37288 418 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 LHX1P48742 406 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
LRP1-209ENST00000555941 CASP5P51878 434 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 NLRP12P59046 1061 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 AMPD3Q01432 767 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
LRP1-209ENST00000555941 LAIR1Q6GTX8 287 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 FAM173BQ6P4H8 233 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 MON1AQ86VX9 555 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 GPD1LQ8N335 351 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 TOP6BLQ8N6T0 577 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 GIPC2Q8TF65 315 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 MRPS31Q92665 395 aaKnown RBP12.37□□□□□ -0.43
LRP1-209ENST00000555941 SAAL1Q96ER3 474 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 TRMT2BQ96GJ1 504 aaKnown RBP12.37□□□□□ -0.43
LRP1-209ENST00000555941 MYRFLQ96LU7 910 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 TNMDQ9H2S6 317 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 KIAA1586Q9HCI6 787 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 DDX43Q9NXZ2 648 aaKnown RBP12.37□□□□□ -0.43
LRP1-209ENST00000555941 GTSE1Q9NYZ3 720 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 MTMR6Q9Y217 621 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 GABRDO14764 452 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 STX6O43752 255 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 TMEM191BP0C7N4 346 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 CYP4F8P98187 520 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 SATB1Q01826 763 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 BFSP1Q12934 665 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 CCINQ13939 588 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 GAS6Q14393 721 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 CFAP221Q4G0U5 840 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 INTS6LQ5JSJ4 861 aaKnown RBP12.36□□□□□ -0.43
LRP1-209ENST00000555941 TXNDC11Q6PKC3 985 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 TMEM150AQ86TG1 271 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 LONP2Q86WA8 852 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 CXorf38Q8TB03 319 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 EXOC4Q96A65 974 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 FUBP3Q96I24 572 aaKnown RBP eCLIP12.36□□□□□ -0.43
LRP1-209ENST00000555941 ZFYVE19Q96K21 471 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 CEP295NLQ96MC4 621 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 FAM83CQ9BQN1 747 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 CBWD1Q9BRT8 395 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 PANK2Q9BZ23 570 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 GKN1Q9NS71 199 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 TDP1Q9NUW8 608 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 TMLHEQ9NVH6 421 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 KBTBD4Q9NVX7 518 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
LRP1-209ENST00000555941 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
LRP1-209ENST00000555941 KIF26AQ9ULI4 1882 aaPredicted RBP12.36□□□□□ -0.43
LRP1-209ENST00000555941 A0A087X0B3 334 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 FOXD2O60548 495 aaPredicted RBP12.35□□□□□ -0.43
LRP1-209ENST00000555941 ATG13O75143 517 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 PPP6R2O75170 966 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 NOL4O94818 638 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 RETP07949 1114 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 KRT19P08727 400 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 MAGEA11P43364 429 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 SOX9P48436 509 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 WNT7BP56706 349 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 SNRPFP62306 86 aaKnown RBP12.35□□□□□ -0.43
LRP1-209ENST00000555941 RUNX3Q13761 415 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 PDGFRLQ15198 375 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 STK38Q15208 465 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 DUOXA2Q1HG44 320 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
LRP1-209ENST00000555941 CC2D1AQ6P1N0 951 aaPredicted RBP12.35□□□□□ -0.43
LRP1-209ENST00000555941 CNNM4Q6P4Q7 775 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 LIMS2Q7Z4I7 341 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 MAB21L3Q8N8X9 362 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 LINC00301Q8NCQ3 95 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 USP13Q92995 863 aaPredicted RBP12.35□□□□□ -0.43
LRP1-209ENST00000555941 ANKRD36BP1Q96IX9 119 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 ZNF396Q96N95 335 aaPredicted RBP12.35□□□□□ -0.43
LRP1-209ENST00000555941 PKMYT1Q99640 499 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 PI4K2AQ9BTU6 479 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 PDE11AQ9HCR9 933 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 INTS13Q9NVM9 706 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 SNX9Q9Y5X1 595 aa12.35□□□□□ -0.43
LRP1-209ENST00000555941 CCDC163A0A0D9SF12 145 aa12.34□□□□□ -0.43
LRP1-209ENST00000555941 GOLGA8IPA6NC78 632 aa12.34□□□□□ -0.43
LRP1-209ENST00000555941 GOLGA8JA6NMD2 632 aa12.34□□□□□ -0.43
LRP1-209ENST00000555941 K7ELQ4 463 aaPredicted RBP12.34□□□□□ -0.43
LRP1-209ENST00000555941 K7ESF4 209 aa12.34□□□□□ -0.43
LRP1-209ENST00000555941 TULP1O00294 542 aaPredicted RBP12.34□□□□□ -0.43
LRP1-209ENST00000555941 TRDMT1O14717 391 aaKnown RBP12.34□□□□□ -0.43
LRP1-209ENST00000555941 SPTLC2O15270 562 aa12.34□□□□□ -0.43
LRP1-209ENST00000555941 EIF3DO15371 548 aaKnown RBP eCLIP12.34□□□□□ -0.432e-7■□□□□ 8.6
LRP1-209ENST00000555941 PRPF6O94906 941 aaKnown RBP12.34□□□□□ -0.43
LRP1-209ENST00000555941 TNNC2P02585 160 aa12.34□□□□□ -0.43
LRP1-209ENST00000555941 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
LRP1-209ENST00000555941 TGM1P22735 817 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms