RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 VCPP55072 806 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 BPIFB4P59827 614 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 NOP14P78316 857 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 GCNT1Q02742 428 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 SLC18A2Q05940 514 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 PICALMQ13492 652 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 HP1BP3Q5SSJ5 553 aaPredicted RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 SLFN13Q68D06 897 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 KLC3Q6P597 504 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ALDH16A1Q8IZ83 802 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 GLIS1Q8NBF1 620 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 FBXL13Q8NEE6 735 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 CYP2W1Q8TAV3 490 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 VCPIP1Q96JH7 1222 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 MAML3Q96JK9 1138 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ST6GALNAC4Q9H4F1 302 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 S100A14Q9HCY8 104 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 RAB20Q9NX57 234 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 NYAP2Q9P242 653 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 PPM1HQ9ULR3 514 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 SORCS3Q9UPU3 1222 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 FARP1Q9Y4F1 1045 aaPredicted RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 SCINQ9Y6U3 715 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 MYPNQ86TC9 1320 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 E7ESA3 106 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 I3L4J1 428 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ZBTB39O15060 712 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 CHMP2AO43633 222 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ZC3H11AO75152 810 aaKnown RBP eCLIP8.16□□□□□ -1.1
CHD8-209ENST00000555935 HLA-DOAP06340 250 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ZSCAN5DPP0CG00 497 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 HARSP12081 509 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 KRT5P13647 590 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ETS2P15036 469 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 CD58P19256 250 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 BGNP21810 368 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 STIP1P31948 543 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 CPA2P48052 419 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 USP46P62068 366 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 TFDP1Q14186 410 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 OASLQ15646 514 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 TRIM72Q6ZMU5 477 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 MON1BQ7L1V2 547 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 USP37Q86T82 979 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 NLRX1Q86UT6 975 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 PPIL6Q8IXY8 311 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 JADE3Q92613 823 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 DHX38Q92620 1227 aaKnown RBP8.16□□□□□ -1.1
CHD8-209ENST00000555935 BTBD9Q96Q07 612 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 THTPAQ9BU02 230 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 KLHL4Q9C0H6 718 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ETNK2Q9NVF9 386 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 ARMCX1Q9P291 453 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 PPME1Q9Y570 386 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 PCDHB2Q9Y5E7 798 aa8.16□□□□□ -1.1
CHD8-209ENST00000555935 FOCADQ5VW36 1801 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 TAF1LQ8IZX4 1826 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 FAM237BA0A1B0GVD1 139 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 CHN2P52757 468 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 EFTUD2Q15029 972 aaKnown RBP eCLIP8.15□□□□□ -1.15e-6■■■■■ 28.3
CHD8-209ENST00000555935 AOC3Q16853 763 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 LRRC38Q5VT99 294 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 ATG16L1Q676U5 607 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 PADI6Q6TGC4 694 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 B3GNT6Q6ZMB0 384 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 C3orf62Q6ZUJ4 267 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 RFX8Q6ZV50 586 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 RAPH1Q70E73 1250 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 ALYREFQ86V81 257 aaKnown RBP8.15□□□□□ -1.1
CHD8-209ENST00000555935 TREML1Q86YW5 311 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 ANKMY2Q8IV38 441 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 TTC17Q96AE7 1141 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 MPP4Q96JB8 637 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 CATSPER2Q96P56 530 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 SLITRK1Q96PX8 696 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 CYTH2Q99418 400 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 WDR18Q9BV38 432 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 ALG13Q9NP73 1137 aaKnown RBP8.15□□□□□ -1.1
CHD8-209ENST00000555935 PPARGC1AQ9UBK2 798 aaKnown RBP8.15□□□□□ -1.1
CHD8-209ENST00000555935 G3BP2Q9UN86 482 aaKnown RBP8.15□□□□□ -1.1
CHD8-209ENST00000555935 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.1
CHD8-209ENST00000555935 SNCAIPQ9Y6H5 919 aa8.15□□□□□ -1.1
CHD8-209ENST00000555935 CNTNAP4Q9C0A0 1308 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 GREB1LQ9C091 1923 aaPredicted RBP8.15□□□□□ -1.11
CHD8-209ENST00000555935 A6NJR5 290 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 TISP43B9A030 160 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 GOLGA8RI6L899 631 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 PEX1O43933 1283 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 PFDN1O60925 122 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 FAM155BO75949 473 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 ADRB2P07550 413 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 VCLP18206 1134 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 SSTR1P30872 391 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 CCNFP41002 786 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 ECE1P42892 770 aa8.15□□□□□ -1.11
CHD8-209ENST00000555935 HPCAP84074 193 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms