RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	BAP1	Q92560	729 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	SYN2	Q92777	582 aa	Predicted RBP	13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	MRPL38	Q96DV4	380 aa	Known RBP	13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	MED10	Q9BTT4	135 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	GPR88	Q9GZN0	384 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	ELOVL4	Q9GZR5	314 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	ZCWPW1	Q9H0M4	648 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	PDCL3	Q9H2J4	239 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	DPEP3	Q9H4B8	488 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	HESX1	Q9UBX0	185 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	GTF3C4	Q9UKN8	822 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	LAMA2	P24043	3122 aa	Known RBP	13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	TSC2	P49815	1807 aa		13.31	□□□□□ -0.28
ABCD4-223	ENST00000555904	EPOP	A6NHQ4	379 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	SOX1	O00570	391 aa	Predicted RBP	13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	FSCN2	O14926	492 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	TEX28	O15482	410 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	THAP12	O43422	761 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	HCRT	O43612	131 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	ATP2C2	O75185	946 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	CNP	P09543	421 aa	Known RBP	13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	PNMA6A	P0CW24	399 aa	Predicted RBP	13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	VDR	P11473	427 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	ROR1	Q01973	937 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	GPR17	Q13304	367 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	STIL	Q15468	1287 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	TPGS2	Q68CL5	300 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	GPR153	Q6NV75	609 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	WHAMM	Q8TF30	809 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	LRCH3	Q96II8	777 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	TWNK	Q96RR1	684 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	GAS2L1	Q99501	681 aa	Predicted RBP	13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	RTP3	Q9BQQ7	232 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	CLSTN3	Q9BQT9	956 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	PRDM12	Q9H4Q4	367 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	RXFP1	Q9HBX9	757 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	ABHD10	Q9NUJ1	306 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	FAM49B	Q9NUQ9	324 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	ABI2	Q9NYB9	513 aa	Predicted RBP	13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	DPP7	Q9UHL4	492 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	CEP83	Q9Y592	693 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	PCDHB5	Q9Y5E4	795 aa		13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	BZW2	Q9Y6E2	419 aa	Known RBP	13.3	□□□□□ -0.28
ABCD4-223	ENST00000555904	MYBPHL	A2RUH7	354 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	SPDYE4	A6NLX3	237 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	HIDE1	A8MVS5	230 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	RFXAP	O00287	272 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	TBC1D4	O60343	1298 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	LILRB3	O75022	631 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	GLUD1	P00367	558 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	OR4Q2	P0C623	313 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	CYP11B1	P15538	503 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	ELF1	P32519	619 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	IRS1	P35568	1242 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	ADK	P55263	362 aa	Known RBP	13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	GSDMD	P57764	484 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	KLHL30	Q0D2K2	578 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	TBX2	Q13207	712 aa	Predicted RBP	13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	CAMK1	Q14012	370 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	RAB33A	Q14088	237 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	TDRD12	Q587J7	1177 aa	Known RBP	13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	HABP4	Q5JVS0	413 aa	Known RBP	13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	SLC47A2	Q86VL8	602 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	VPS36	Q86VN1	386 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	ZNF677	Q86XU0	584 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	C12orf29	Q8N999	325 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	ZNF461	Q8TAF7	563 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	SPPL2B	Q8TCT7	592 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	SLC2A14	Q8TDB8	520 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	MYLPF	Q96A32	169 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	CYFIP2	Q96F07	1278 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	PCED1B	Q96HM7	432 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	PGLYRP2	Q96PD5	576 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	KLHL5	Q96PQ7	755 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	TMEM209	Q96SK2	561 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	DNAJC7	Q99615	494 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	TTYH1	Q9H313	450 aa	Predicted RBP	13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	TLE6	Q9H808	572 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	ABCB6	Q9NP58	842 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	CRTAC1	Q9NQ79	661 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	AIPL1	Q9NZN9	384 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	LMCD1	Q9NZU5	365 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	MAFF	Q9ULX9	164 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	PLXNA4	Q9HCM2	1894 aa		13.29	□□□□□ -0.28
ABCD4-223	ENST00000555904	COL4A4	P53420	1690 aa	Predicted RBP	13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	WDR27	A2RRH5	827 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	RNF225	M0QZC1	329 aa	Predicted RBP	13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	PRRG1	O14668	218 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	NRDC	O43847	1150 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	PTMA	P06454	111 aa	Known RBP	13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	FAM200B	P0CF97	657 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	SRGAP2B	P0DMP2	458 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	CCDC130	P13994	396 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	BRD2	P25440	801 aa	Known RBP	13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	ADORA2B	P29275	332 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	CLCN1	P35523	988 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	GRIN2C	Q14957	1233 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	GOLGA7B	Q2TAP0	167 aa		13.28	□□□□□ -0.28
ABCD4-223	ENST00000555904	LIN9	Q5TKA1	542 aa		13.28	□□□□□ -0.28

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