RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 PSMC2P35998 433 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GCLMP48507 274 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TUFMP49411 452 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PSMC1P62191 440 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 UBE2HP62256 183 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MYL7Q01449 175 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TSPY1Q01534 308 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PPP3CAQ08209 521 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MTMR3Q13615 1198 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 HTR4Q13639 388 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NCOA4Q13772 614 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PDZD4Q76G19 769 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 STKLD1Q8NE28 680 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 FAM200AQ8TCP9 573 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PLA2G2FQ9BZM2 168 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MMRN2Q9H8L6 949 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CRTAC1Q9NQ79 661 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 AVENQ9NQS1 362 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PCDHB5Q9Y5E4 795 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NUMBLQ9Y6R0 609 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NOTCH4Q99466 2003 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TECTAO75443 2155 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ZNF197O14709 1029 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 IKBKBO14920 756 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MAPK13O15264 365 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ATICP31939 592 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 RAP1GAPP47736 663 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 AP3M2P53677 418 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SMARCB1Q12824 385 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TEAD2Q15562 447 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 DDR2Q16832 855 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 EDRF1Q3B7T1 1238 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ZACNQ401N2 412 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 COBLL1Q53SF7 1204 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TANGO2Q6ICL3 276 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SPOPLQ6IQ16 392 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TMC8Q8IU68 726 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 UBALD2Q8IYN6 164 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 OR6B3Q8NGW1 331 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SPPL2BQ8TCT7 592 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 KXD1Q9BQD3 176 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SYT15Q9BQS2 421 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SDCBP2Q9H190 292 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SNX25Q9H3E2 840 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ASAH2Q9NR71 780 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 HSFX1Q9UBD0 423 aa13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ZFP37Q9Y6Q3 630 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC6B-205ENST00000555269 A0A1W2PRU2 124 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CETN3O15182 167 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TACC1O75410 805 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 STAU1O95793 577 aaKnown RBP13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 HLA-DRAP01903 254 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CFHP08603 1231 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 KRT13P13646 458 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PCSK1P29120 753 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 EPHA5P54756 1037 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TNNC1P63316 161 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GPC5P78333 572 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PLD1Q13393 1074 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MORC3Q14149 939 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NFE2Q16621 373 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SGSM1Q2NKQ1 1148 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ZNF699Q32M78 642 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 FAM78AQ5JUQ0 283 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 KLHL10Q6JEL2 608 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 INTS8Q75QN2 995 aaKnown RBP13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GAREM2Q75VX8 874 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SHKBP1Q8TBC3 707 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 C2orf15Q8WU43 125 aaKnown RBP13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PSMG2Q969U7 264 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 DPEP3Q9H4B8 488 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SMYD3Q9H7B4 428 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GDE1Q9NZC3 331 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ASB3Q9Y575 518 aa13.28□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MICAL2O94851 1124 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CLSTN1O94985 981 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 FAM163BP0C2L3 166 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 PTPN1P18031 435 aaKnown RBP13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 BDNFP23560 247 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 CCNE1P24864 410 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 VIPR2P41587 438 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 FKBP3Q00688 224 aaKnown RBP13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 ZNF667Q5HYK9 610 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 STXBP5Q5T5C0 1151 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SCARA5Q6ZMJ2 495 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 BMP8AQ7Z5Y6 402 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SPATA2LQ8IUW3 424 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SCN4BQ8IWT1 228 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 SEMA4DQ92854 862 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 NXPE3Q969Y0 559 aa13.27□□□□□ -0.29
TRAPPC6B-205ENST00000555269 DHTKD1Q96HY7 919 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms