RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 USP24Q9UPU5 2620 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 ITGB3P05106 788 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 NLRP12P59046 1061 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 TSPY1Q01534 308 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 LMNB2Q03252 620 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 ALCAMQ13740 583 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 PON2Q15165 354 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 NFE2Q16621 373 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 ITPRIPL2Q3MIP1 535 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 LRRC52Q8N7C0 313 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 CHFRQ96EP1 664 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 USP28Q96RU2 1077 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 FAM83CQ9BQN1 747 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 CBWD1Q9BRT8 395 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 RBAKQ9NYW8 714 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 SIX4Q9UIU6 781 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 AGAP1Q9UPQ3 857 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 CCL26Q9Y258 94 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 CHD6Q8TD26 2715 aa16.88■□□□□ 0.29
ARHGEF40-205ENST00000555052 PRR5-ARHGAP8B1AHC4 643 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 CHURC1-FNTBB4DL54 471 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 HRO43593 1189 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 LDHAP00338 332 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 DDX6P26196 483 aaKnown RBP eCLIP16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 HOXA6P31267 233 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 FNTBP49356 437 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 GPR15P49685 360 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 ARHGAP8P85298 464 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 CEBPZQ03701 1054 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 SLC39A14Q15043 492 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 TAF12Q16514 161 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 LPAL2Q16609 132 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 TMEM86AQ8N2M4 240 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 SYNPOQ8N3V7 929 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 STKLD1Q8NE28 680 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 RIN3Q8TB24 985 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 USP13Q92995 863 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 ACBD6Q9BR61 282 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 ABCB6Q9NP58 842 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 HPS4Q9NQG7 708 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 THG1LQ9NWX6 298 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 GDAP2Q9NXN4 497 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 ITGA11Q9UKX5 1188 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 RAB23Q9ULC3 237 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 USP18Q9UMW8 372 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 MTMR6Q9Y217 621 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 RALGAPA1Q6GYQ0 2036 aa16.87■□□□□ 0.29
ARHGEF40-205ENST00000555052 GOLGA8IPA6NC78 632 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 GOLGA8JA6NMD2 632 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 SOBPA7XYQ1 873 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 EXTL3O43909 919 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 LRP3O75074 770 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 TADA3O75528 432 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 RETP07949 1114 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 CSH1P0DML2 217 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 CSH2P0DML3 217 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 IDEP14735 1019 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 SDHBP21912 280 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 CNR2P34972 360 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 AVPR1AP37288 418 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 STAT6P42226 847 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 ATXN1P54253 815 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 CCDC142Q17RM4 750 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 INTS6LQ5JSJ4 861 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 LONP2Q86WA8 852 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 MAB21L3Q8N8X9 362 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 SPATA18Q8TC71 538 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 CACTINQ8WUQ7 758 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 PI4K2AQ9BTU6 479 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 KIF9Q9HAQ2 790 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 PDE11AQ9HCR9 933 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 GKN1Q9NS71 199 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 FRYQ5TBA9 3013 aa16.86■□□□□ 0.29
ARHGEF40-205ENST00000555052 OTOL1A6NHN0 477 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 GABRDO14764 452 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 HUS1O60921 280 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 PRPF40AO75400 957 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 NOL4O94818 638 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 CYP2F1P24903 491 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 HOXC13P31276 330 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 BFSP1Q12934 665 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 SRSF5Q13243 272 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 ZNF268Q14587 947 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 SDHAF4Q5VUM1 108 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 TXNDC8Q6A555 127 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 LIMS2Q7Z4I7 341 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 MON1AQ86VX9 555 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 SYCP3Q8IZU3 236 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 CSGALNACT2Q8N6G5 542 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 TOP6BLQ8N6T0 577 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 TRMT2BQ96GJ1 504 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 INTS4Q96HW7 963 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 PANK2Q9BZ23 570 aa16.85■□□□□ 0.29
ARHGEF40-205ENST00000555052 MTMR12Q9C0I1 747 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms