RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ATMINO43313 823 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 SFSWAPQ12872 951 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 TRADDQ15628 312 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 DENND6AQ8IWF6 608 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 SNPHO15079 494 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 CYP26A1O43174 497 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 UBTFL6P0CB48 400 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 MYL4P12829 197 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 FNTAP49354 379 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PDK1Q15118 436 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 DCAF6Q58WW2 860 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 RIC8BQ9NVN3 520 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 FBXO10Q9UK96 956 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 KLHL20Q9Y2M5 609 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF518AQ6AHZ1 1483 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 LRRC14BA6NHZ5 514 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 DYNC1LI2O43237 492 aaPredicted RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 ALBP02768 609 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 PSMA4P25789 261 aaKnown RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 NUDT2P50583 147 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 PDIA6Q15084 440 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 RNFT2Q96EX2 444 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 CYP39A1Q9NYL5 469 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 TPST1O60507 370 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 FGRP09769 529 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 DGKDQ16760 1214 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 P3H2Q8IVL5 708 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 DCP1BQ8IZD4 617 aaKnown RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 PHACTR1Q9C0D0 580 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 TRIT1Q9H3H1 467 aaKnown RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 VPS26AO75436 327 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 FGFR1P11362 822 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 CKBP12277 381 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 KCNA3P22001 575 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 PTK7Q13308 1070 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 NCOA4Q13772 614 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 CCDC137Q6PK04 289 aaKnown RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 SERAC1Q96JX3 654 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 S100A13Q99584 98 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 SLC38A7Q9NVC3 462 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 RGS12O14924 1447 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 TRAPPC8Q9Y2L5 1435 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 TIPRLO75663 272 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 RBP5P82980 135 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 CYP24A1Q07973 514 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 SNAPC2Q13487 334 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 AMHR2Q16671 573 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 TRIQKQ629K1 86 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 DENND5BQ6ZUT9 1274 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 LRRC8DQ7L1W4 858 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 CHST12Q9NRB3 414 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 RAB6BQ9NRW1 208 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 ADAM30Q9UKF2 790 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 TDRKHQ9Y2W6 561 aaKnown RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 NINQ8N4C6 2090 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 GCC2Q8IWJ2 1684 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 VWA5AO00534 786 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 RPS6KA5O75582 802 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 UMPSP11172 480 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 ANXA11P50995 505 aaKnown RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 SCNN1BP51168 640 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 HIRAP54198 1017 aaPredicted RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 TTC33Q6PID6 262 aaPredicted RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 R3HCC1LQ7Z5L2 792 aaKnown RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 SCFD2Q8WU76 684 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 YME1L1Q96TA2 773 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 RHOBTB2Q9BYZ6 727 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 SH3GLB2Q9NR46 395 aa7.15□□□□□ -1.26
SYNE2-216ENST00000555002 EIF3LQ9Y262 564 aaKnown RBP7.15□□□□□ -1.26
SYNE2-216ENST00000555002 SFNP31947 248 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 GRAPQ13588 217 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 KNOP1Q1ED39 458 aaKnown RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 WLSQ5T9L3 541 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 KLHL17Q6TDP4 642 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 SLC13A5Q86YT5 568 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 CYP4Z2PQ8N1L4 340 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 GRAPLQ8TC17 118 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 ZFYVE28Q9HCC9 887 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 TBC1D22BQ9NU19 505 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 IL1RAPL1Q9NZN1 696 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 SAE1Q9UBE0 346 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 ZMYND8Q9ULU4 1186 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF335Q9H4Z2 1342 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 CELF2O95319 508 aaKnown RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 TAP1Q03518 808 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 TRIP10Q15642 601 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 ARMCX4Q5H9R4 360 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 SLC44A5Q8NCS7 719 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 EIF2AK1Q9BQI3 630 aaKnown RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 ZC3H11AO75152 810 aaKnown RBP eCLIP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 PTPN1P18031 435 aaKnown RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 TALDO1P37837 337 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 PTK6Q13882 451 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 C12orf60Q5U649 245 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 GLB1LQ6UWU2 654 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 CYP4X1Q8N118 509 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 MDM1Q8TC05 714 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 UBXN6Q9BZV1 441 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 RGS2P41220 211 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 CCSAPQ6IQ19 270 aaPredicted RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms