RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 JAM2P57087 298 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 FMO1Q01740 532 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 KYAT1Q16773 422 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 TAPT1Q6NXT6 567 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 RASAL3Q86YV0 1011 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 MIPOL1Q8TD10 442 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 TTI1O43156 1089 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 DAPK3O43293 454 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 EPHB4P54760 987 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 ARHGEF6Q15052 776 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 CLUL1Q15846 466 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 ZC3H3Q8IXZ2 948 aaKnown RBP17.45■□□□□ 0.38
PCNX1-209ENST00000554879 USP38Q8NB14 1042 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 SMC1BQ8NDV3 1235 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 LRRC4Q9HBW1 653 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 DNAJC25-GNG10A0A024R161 153 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 CCDC188H7C350 402 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 KCNJ1P48048 391 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 ARPP19P56211 112 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 GRB14Q14449 540 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 CLEC16AQ2KHT3 1053 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 RFX6Q8HWS3 928 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 CREG2Q8IUH2 290 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 HDAC7Q8WUI4 952 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 MAIP1Q8WWC4 291 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 NT5C1AQ9BXI3 368 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 WNT8AQ9H1J5 351 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 PDE4DIPQ5VU43 2346 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 SLC27A1Q6PCB7 646 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 KCTD6Q8NC69 237 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 KLHL29Q96CT2 875 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 GLT1D1Q96MS3 346 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 TRIM51Q9BSJ1 452 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 MORF4L1Q9UBU8 362 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 RAD51CO43502 376 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 GHRP10912 638 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 TSNAXIP1Q2TAA8 658 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 PPP6R3Q5H9R7 873 aaPredicted RBP17.44■□□□□ 0.38
PCNX1-209ENST00000554879 OLFML2BQ68BL8 750 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 MGARPQ8TDB4 240 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 SMYD3Q9H7B4 428 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 RECQL4O94761 1208 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 TARBP2Q15633 366 aaKnown RBP17.44■□□□□ 0.38
PCNX1-209ENST00000554879 DCAF4L1Q3SXM0 396 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 DAB2IPQ5VWQ8 1189 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 SAPCD2Q86UD0 394 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 WHAMMQ8TF30 809 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 ZSCAN5CA6NGD5 496 aaPredicted RBP17.44■□□□□ 0.38
PCNX1-209ENST00000554879 C4BPAP04003 597 aaKnown RBP17.44■□□□□ 0.38
PCNX1-209ENST00000554879 ITGA4P13612 1032 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 PPP2R5EQ16537 467 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 SMTNL2Q2TAL5 461 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 CCDC89Q8N998 374 aa17.44■□□□□ 0.38
PCNX1-209ENST00000554879 SYF2O95926 243 aaKnown RBP17.43■□□□□ 0.38
PCNX1-209ENST00000554879 LCP1P13796 627 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 MBTD1Q05BQ5 628 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 SPOUT1Q5T280 376 aaKnown RBP17.43■□□□□ 0.38
PCNX1-209ENST00000554879 ZNF677Q86XU0 584 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 ZNF354CQ86Y25 554 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 TEKT4Q8WW24 435 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 MTG1Q9BT17 334 aaPredicted RBP17.43■□□□□ 0.38
PCNX1-209ENST00000554879 AOC2O75106 756 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
PCNX1-209ENST00000554879 SP3Q02447 781 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 TMED1Q13445 227 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 ASTE1Q2TB18 679 aaPredicted RBP17.43■□□□□ 0.38
PCNX1-209ENST00000554879 AADACL2Q6P093 401 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 RHOT1Q8IXI2 618 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 PCDHGC5Q9Y5F6 944 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 PASKQ96RG2 1323 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 CSPG5O95196 566 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 ALDH1A1P00352 501 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 DHX9Q08211 1270 aaKnown RBP17.43■□□□□ 0.38
PCNX1-209ENST00000554879 ACBD5Q5T8D3 534 aaPredicted RBP17.43■□□□□ 0.38
PCNX1-209ENST00000554879 PPP1R2P3Q6NXS1 205 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 STRIP2Q9ULQ0 834 aa17.43■□□□□ 0.38
PCNX1-209ENST00000554879 SIPA1L1O43166 1804 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 STBD1O95210 358 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 CARSP49589 748 aaKnown RBP17.42■□□□□ 0.38
PCNX1-209ENST00000554879 AMPD2Q01433 879 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 RNF180Q86T96 592 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 ZNF410Q86VK4 478 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 MCOLN2Q8IZK6 566 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 EMC1Q8N766 993 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 RSAD2Q8WXG1 361 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 EPN3Q9H201 632 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 NXF3Q9H4D5 531 aaKnown RBP17.42■□□□□ 0.38
PCNX1-209ENST00000554879 IP6K2Q9UHH9 426 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 SGK1O00141 431 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 PRPSAP2O60256 369 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 CCDC137Q6PK04 289 aaKnown RBP17.42■□□□□ 0.38
PCNX1-209ENST00000554879 CCDC197Q8NCU1 140 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 APPL2Q8NEU8 664 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 KRT35Q92764 455 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 ZNF560Q96MR9 790 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 APOBEC3GQ9HC16 384 aaKnown RBP17.42■□□□□ 0.38
PCNX1-209ENST00000554879 SOCS7O14512 581 aa17.42■□□□□ 0.38
PCNX1-209ENST00000554879 NT5DC3Q86UY8 548 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms