RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CTAGE5O15320 804 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 SEPT4O43236 478 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 SLC26A4O43511 780 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 DUSP11O75319 330 aaKnown RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 MED24O75448 989 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 SLITRK3O94933 977 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 ASMTLO95671 621 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 SUPT20HL2P0C7V6 817 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 AKR1A1P14550 325 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 RPA1P27694 616 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 SFNP31947 248 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 LTBRP36941 435 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 CCT6AP40227 531 aaKnown RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 UBA7P41226 1012 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 JAK3P52333 1124 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 NKX3-2P78367 333 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 MVKQ03426 396 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 MESP2Q0VG99 397 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 CTTNQ14247 550 aaKnown RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 SNX17Q15036 470 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 KARSQ15046 597 aaKnown RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 TMEM119Q4V9L6 283 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 PLEKHG4Q58EX7 1191 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 TRIM61Q5EBN2 209 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 EGFLAMQ63HQ2 1017 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 PRR23BQ6ZRT6 265 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 KCNK18Q7Z418 384 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 TLK2Q86UE8 772 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 CATSPER3Q86XQ3 398 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 KRTAP1-3Q8IUG1 177 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 CCDC60Q8IWA6 550 aaPredicted RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 SMAP1Q8IYB5 467 aaPredicted RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 FBXO15Q8NCQ5 510 aaPredicted RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 GSTCDQ8NEC7 633 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 PPTC7Q8NI37 304 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 AFG1LQ8WV93 481 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 SEPT1Q8WYJ6 367 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 DIO2Q92813 273 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 SPATA33Q96N06 139 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 POLR3CQ9BUI4 534 aaPredicted RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 PANK2Q9BZ23 570 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 UPF3AQ9H1J1 476 aaKnown RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 TUFT1Q9NNX1 390 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 WRAP73Q9P2S5 460 aaPredicted RBP7□□□□□ -1.29
SCFD1-212ENST00000554486 IMPACTQ9P2X3 320 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 ACSL6Q9UKU0 697 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 Q9Y3F1 56 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 DNAH12Q6ZR08 3092 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 KIAA0100Q14667 2235 aaKnown RBP6.99□□□□□ -1.29
SCFD1-212ENST00000554486 TRBV23OR9-2A0A075B6M9 112 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 A0A087WWV3 80 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-212ENST00000554486 MYADML2A6NDP7 307 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 POLR2DO15514 142 aaKnown RBP6.99□□□□□ -1.29
SCFD1-212ENST00000554486 ZNF202O95125 648 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 STBD1O95210 358 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 MMP3P08254 477 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 CNGA1P29973 690 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 TCF7P36402 384 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-212ENST00000554486 SYKP43405 635 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 GJA9P57773 515 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 PSMC6P62333 389 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 CYP4A11Q02928 519 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 FZD5Q13467 585 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 SLC9C1Q4G0N8 1177 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 KRT79Q5XKE5 535 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 HAUS3Q68CZ6 603 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 IQCEQ6IPM2 695 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 SWSAP1Q6NVH7 229 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 MIS18BP1Q6P0N0 1132 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 FBXO46Q6PJ61 603 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-212ENST00000554486 CCDC73Q6ZRK6 1079 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 PDILTQ8N807 584 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 ERMNQ8TAM6 284 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 NEK9Q8TD19 979 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 PTPRN2Q92932 1015 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 DHX58Q96C10 678 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 SCLYQ96I15 445 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 PLIN2Q99541 437 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 LXNQ9BS40 222 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 NSUN3Q9H649 340 aaKnown RBP6.99□□□□□ -1.29
SCFD1-212ENST00000554486 TRIM39Q9HCM9 518 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 GPR27Q9NS67 375 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 BLOC1S4Q9NUP1 217 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 GABBR1Q9UBS5 961 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 DDX20Q9UHI6 824 aaKnown RBP6.99□□□□□ -1.29
SCFD1-212ENST00000554486 TCEAL9Q9UHQ7 104 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 PCDHA10Q9Y5I2 948 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 KAT6AQ92794 2004 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 LOXHD1Q8IVV2 1947 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 SYNRGQ9UMZ2 1314 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 IGSF9BQ9UPX0 1349 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 KDM3AQ9Y4C1 1321 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 TRIP12Q14669 1992 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-212ENST00000554486 SCN10AQ9Y5Y9 1956 aa6.99□□□□□ -1.29
SCFD1-212ENST00000554486 DBX1A6NMT0 343 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 PLD2O14939 933 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 LYPLA2O95372 231 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 PGK1P00558 417 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 LGALS2P05162 132 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms