RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 MESP2Q0VG99 397 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 LMAN2Q12907 356 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 NOLC1Q14978 699 aaKnown RBP eCLIP9.85□□□□□ -0.83
PRKCH-208ENST00000553846 PDGFRLQ15198 375 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 EML3Q32P44 896 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 UAP1L1Q3KQV9 507 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 TRIM61Q5EBN2 209 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 TXNDC8Q6A555 127 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 C19orf48Q6RUI8 117 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 LRRTM3Q86VH5 581 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 CHCHD4Q8N4Q1 142 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 FRMD1Q8N878 549 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 TSTD1Q8NFU3 115 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 ADAM32Q8TC27 787 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 CD101Q93033 1021 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 SLC22A12Q96S37 553 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 RUSC1Q9BVN2 902 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 PLEKHA5Q9HAU0 1116 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 CAPN10Q9HC96 672 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 ORC3Q9UBD5 711 aaPredicted RBP9.85□□□□□ -0.83
PRKCH-208ENST00000553846 PILRBQ9UKJ0 227 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 MMP17Q9ULZ9 603 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 CYP46A1Q9Y6A2 500 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 CEP192Q8TEP8 1941 aa9.85□□□□□ -0.83
PRKCH-208ENST00000553846 ANO9A1A5B4 782 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 EPB41L2O43491 1005 aaKnown RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 HIP1RO75146 1068 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 HAPLN1P10915 354 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 DDX6P26196 483 aaKnown RBP eCLIP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 HOXD12P35452 270 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 MAPK8P45983 427 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 TUFMP49411 452 aaKnown RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 SCAPQ12770 1279 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 MTF1Q14872 753 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 ENOX2Q16206 610 aaKnown RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 CRY1Q16526 586 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 MAP7D1Q3KQU3 841 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 SLC39A12Q504Y0 691 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 USP39Q53GS9 565 aaKnown RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 ANO7Q6IWH7 933 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 TMEM92Q6UXU6 159 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 ZPBP2Q6X784 338 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 CCNI2Q6ZMN8 369 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 MON1AQ86VX9 555 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 SYT12Q8IV01 421 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 SFTPA1Q8IWL2 248 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 DIS3L2Q8IYB7 885 aaKnown RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 C4orf32Q8N8J7 132 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 MAB21L3Q8N8X9 362 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 TMEM161BQ8NDZ6 487 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 OSCP1Q8WVF1 389 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 PIGKQ92643 395 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 KIF12Q96FN5 646 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 SENP8Q96LD8 212 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 SEPT5Q99719 369 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 SLC32A1Q9H598 525 aa9.84□□□□□ -0.83
PRKCH-208ENST00000553846 UBQLN1Q9UMX0 589 aaKnown RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 URB1O60287 2271 aaKnown RBP9.84□□□□□ -0.83
PRKCH-208ENST00000553846 MYH11P35749 1972 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 CYSRT1A8MQ03 144 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 PIRO00625 290 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 CLTAP09496 248 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 MAPTP10636 758 aaKnown RBP9.83□□□□□ -0.84
PRKCH-208ENST00000553846 HARSP12081 509 aaKnown RBP9.83□□□□□ -0.84
PRKCH-208ENST00000553846 TCF3P15923 654 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 MCM7P33993 719 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 AVPR1AP37288 418 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 TNFSF9P41273 254 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
PRKCH-208ENST00000553846 CDR1P51861 262 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 IRX6P78412 446 aaPredicted RBP9.83□□□□□ -0.84
PRKCH-208ENST00000553846 ZXDBP98169 803 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 AMPD2Q01433 879 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 DMP1Q13316 513 aaPredicted RBP9.83□□□□□ -0.84
PRKCH-208ENST00000553846 VEPH1Q14D04 833 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 ZNF423Q2M1K9 1284 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 SPDYCQ5MJ68 293 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 SPATA1Q5VX52 437 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 C1orf186Q6ZWK4 172 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 USP37Q86T82 979 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 CPA6Q8N4T0 437 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 STKLD1Q8NE28 680 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 GIPC2Q8TF65 315 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 SPIRE2Q8WWL2 714 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 ADAMTS14Q8WXS8 1223 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 GCNAQ96QF7 691 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 CCSER1Q9C0I3 900 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 C17orf75Q9HAS0 396 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 SCUBE2Q9NQ36 999 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 FSCN3Q9NQT6 498 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 TMLHEQ9NVH6 421 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 GCNT4Q9P109 453 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 DKK4Q9UBT3 224 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 RBM19Q9Y4C8 960 aaKnown RBP9.83□□□□□ -0.84
PRKCH-208ENST00000553846 WNT6Q9Y6F9 365 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 MYO18BQ8IUG5 2567 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 PTPRQQ9UMZ3 2332 aa9.83□□□□□ -0.84
PRKCH-208ENST00000553846 HECTD1Q9ULT8 2610 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms