RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 NXPE3Q969Y0 559 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 ELMO3Q96BJ8 720 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 LPIN3Q9BQK8 851 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 PI4K2AQ9BTU6 479 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 ABCB6Q9NP58 842 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 CRTAC1Q9NQ79 661 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 GDE1Q9NZC3 331 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 CDH9Q9ULB4 789 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 ASB3Q9Y575 518 aa21.8■■□□□ 1.08
FOXA1-203ENST00000553751 ZNF197O14709 1029 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 SLC16A3O15427 465 aaKnown RBP21.79■■□□□ 1.08
FOXA1-203ENST00000553751 ATP2C2O75185 946 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 EPB41P11171 864 aaKnown RBP21.79■■□□□ 1.08
FOXA1-203ENST00000553751 MYL4P12829 197 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 CCNE1P24864 410 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 PPP1R2P41236 205 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 FKBP3Q00688 224 aaKnown RBP21.79■■□□□ 1.08
FOXA1-203ENST00000553751 ZNF667Q5HYK9 610 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 PARM1Q6UWI2 310 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 DHTKD1Q96HY7 919 aaPredicted RBP21.79■■□□□ 1.08
FOXA1-203ENST00000553751 SMYD3Q9H7B4 428 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 ZNF334Q9HCZ1 680 aaPredicted RBP21.79■■□□□ 1.08
FOXA1-203ENST00000553751 DUSP12Q9UNI6 340 aa21.79■■□□□ 1.08
FOXA1-203ENST00000553751 PPP1R3GB7ZBB8 358 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 NARSO43776 548 aaKnown RBP21.78■■□□□ 1.08
FOXA1-203ENST00000553751 ASS1P00966 412 aaKnown RBP21.78■■□□□ 1.08
FOXA1-203ENST00000553751 HLA-DRAP01903 254 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 GNL1P36915 607 aaPredicted RBP21.78■■□□□ 1.08
FOXA1-203ENST00000553751 PIK3CAP42336 1068 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 CAMK4Q16566 473 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 SGSM1Q2NKQ1 1148 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 CFAP221Q4G0U5 840 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 HFE2Q6ZVN8 426 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 MTSS1LQ765P7 747 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 DNAJB7Q7Z6W7 309 aaPredicted RBP21.78■■□□□ 1.08
FOXA1-203ENST00000553751 ITIH5Q86UX2 942 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 SLC44A3Q8N4M1 653 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 SHKBP1Q8TBC3 707 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 TAS1R2Q8TE23 839 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 TAF4BQ92750 862 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 MCRS1Q96EZ8 462 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 IPO9Q96P70 1041 aaKnown RBP21.78■■□□□ 1.08
FOXA1-203ENST00000553751 SNX25Q9H3E2 840 aa21.78■■□□□ 1.08
FOXA1-203ENST00000553751 CLSTN1O94985 981 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 PDGFRBP09619 1106 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 GJA1P17302 382 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 CYP2F1P24903 491 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 GTF2H1P32780 548 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 RAP1GAPP47736 663 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 GPR15P49685 360 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 VEPH1Q14D04 833 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 SCARA5Q6ZMJ2 495 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 SPATA2LQ8IUW3 424 aaPredicted RBP21.77■■□□□ 1.08
FOXA1-203ENST00000553751 OR6B3Q8NGW1 331 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 FAM200AQ8TCP9 573 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 MYLPFQ96A32 169 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 FUBP3Q96I24 572 aaKnown RBP eCLIP21.77■■□□□ 1.08
FOXA1-203ENST00000553751 RPP25Q9BUL9 199 aaKnown RBP21.77■■□□□ 1.08
FOXA1-203ENST00000553751 MMRN2Q9H8L6 949 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 TMEM8AQ9HCN3 771 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 KIAA1468Q9P260 1216 aa21.77■■□□□ 1.08
FOXA1-203ENST00000553751 ASPAP45381 313 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 TEAD2Q15562 447 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 MAPRE1Q15691 268 aaKnown RBP21.76■■□□□ 1.07
FOXA1-203ENST00000553751 SPOPLQ6IQ16 392 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 KLHL10Q6JEL2 608 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 TTI2Q6NXR4 508 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 C4orf50Q6ZRC1 276 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 GAREM2Q75VX8 874 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 BMP8AQ7Z5Y6 402 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 TRIML1Q8N9V2 468 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 GPR152Q8TDT2 470 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 GIPC2Q8TF65 315 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 DUSP9Q99956 384 aaKnown RBP21.76■■□□□ 1.07
FOXA1-203ENST00000553751 SDCBP2Q9H190 292 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 DPEP3Q9H4B8 488 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 CTNND2Q9UQB3 1225 aa21.76■■□□□ 1.07
FOXA1-203ENST00000553751 ZDBF2Q9HCK1 2354 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 PTPRDP23468 1912 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 A0A1W2PRU2 124 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 A8MXQ7 604 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 FCARP24071 287 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 CDH8P55286 799 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 MDH1BQ5I0G3 518 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 SDHAF4Q5VUM1 108 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 KRT39Q6A163 491 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 FOXR2Q6PJQ5 311 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 MYCBPAPQ8TBZ2 947 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 NELFBQ8WX92 580 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 PCED1BQ96HM7 432 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 ZSWIM3Q96MP5 696 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 KXD1Q9BQD3 176 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 CLSTN2Q9H4D0 955 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 IL21Q9HBE4 155 aa21.75■■□□□ 1.07
FOXA1-203ENST00000553751 LRRN2O75325 713 aa21.74■■□□□ 1.07
FOXA1-203ENST00000553751 SRFP11831 508 aa21.74■■□□□ 1.07
FOXA1-203ENST00000553751 P4HA1P13674 534 aa21.74■■□□□ 1.07
FOXA1-203ENST00000553751 HMGA1P17096 107 aaKnown RBP21.74■■□□□ 1.07
FOXA1-203ENST00000553751 MAGEA11P43364 429 aa21.74■■□□□ 1.07
FOXA1-203ENST00000553751 MXI1P50539 228 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms