RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MAFGO15525 162 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 EDF1O60869 148 aaKnown RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 UBA1P22314 1058 aaKnown RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 CA4P22748 312 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 OTUD4Q01804 1114 aaKnown RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 EN1Q05925 392 aaPredicted RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 MCL1Q07820 350 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 CCDC15Q0P6D6 951 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 TAF5Q15542 800 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 PDK4Q16654 411 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 MAPK6Q16659 721 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 DCUN1D2Q6PH85 259 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 CDR2LQ86X02 465 aaPredicted RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 SCYL3Q8IZE3 742 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 EMC1Q8N766 993 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF280CQ8ND82 737 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 ACTL9Q8TC94 416 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 CPT1BQ92523 772 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 NKD2Q969F2 451 aaPredicted RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 WRNIP1Q96S55 665 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 KLF6Q99612 283 aaPredicted RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 ACAD9Q9H845 621 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 PCDH9Q9HC56 1237 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 HAO1Q9UJM8 370 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 ADAMTS5Q9UNA0 930 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 POLIQ9UNA4 740 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 SHOC2Q9UQ13 582 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 STARD13Q9Y3M8 1113 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 SSC5DA1L4H1 1573 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 GOLGA8RI6L899 631 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ABLIM1O14639 778 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ALOX15BO15296 676 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 MSCO60682 206 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 DIAPH2O60879 1101 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 LRCH4O75427 683 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ATG7O95352 703 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 CBX6O95503 412 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 CALB1P05937 261 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ITGAVP06756 1048 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 POTEJP0CG39 1038 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 T-ENOLP0DO92 83 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 GM2AP17900 193 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ADRA1DP25100 572 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 PTPN7P35236 360 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 RFC1P35251 1148 aaPredicted RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ASPAP45381 313 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 CTCFP49711 727 aaPredicted RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 CLNS1AP54105 237 aaKnown RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 PLCB3Q01970 1234 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 SPARCL1Q14515 664 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 EFHC2Q5JST6 749 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 SYCP2LQ5T4T6 812 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 LRRC38Q5VT99 294 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF449Q6P9G9 518 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 LVRNQ6Q4G3 990 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 OTOAQ7RTW8 1153 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 TRIM50Q86XT4 487 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 CEP120Q8N960 986 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 KCNV2Q8TDN2 545 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 MZB1Q8WU39 189 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 SLC7A3Q8WY07 619 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZBTB10Q96DT7 871 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 TTC25Q96NG3 672 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 SMC6Q96SB8 1091 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 TACO1Q9BSH4 297 aaKnown RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 TEX13BQ9BXU2 312 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 FOXP3Q9BZS1 431 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 NIF3L1Q9GZT8 377 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 UBN1Q9NPG3 1134 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 KANSL3Q9P2N6 904 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 PSMC3IPQ9P2W1 217 aaPredicted RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 NKX1-2Q9UD57 310 aaPredicted RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 HMGXB4Q9UGU5 601 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 RABGEF1Q9UJ41 708 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 AFG3L2Q9Y4W6 797 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 PTPRFP10586 1907 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 PAPPA2Q9BXP8 1791 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 BRCA1P38398 1863 aaKnown RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 WDR91A4D1P6 747 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 SPDYE16A6NNV3 312 aaPredicted RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ADCY3O60266 1144 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 LSM8O95777 96 aaKnown RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 KRT4P19013 534 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 YARSP54577 528 aaKnown RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF280AP59817 542 aaPredicted RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 LMNB2Q03252 620 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 TNFAIP1Q13829 316 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 TARBP2Q15633 366 aaKnown RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 HIF1AQ16665 826 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 GNPTABQ3T906 1256 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 RAB6CQ53S08 254 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 PLEKHG4Q58EX7 1191 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 SLFN12LQ6IEE8 588 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 RGS9BPQ6ZS82 235 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 CENPUQ71F23 418 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 WDR49Q8IV35 697 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 UNC45BQ8IWX7 931 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 MICALL2Q8IY33 904 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 FBF1Q8TES7 1133 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 KCNN1Q92952 543 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms