RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 INCA1Q0VD86 236 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 DUSP4Q13115 394 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 SMAD4Q13485 552 aaKnown RBP14.76□□□□□ -0.05
TUBB3-202ENST00000553656 IQCB1Q15051 598 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 PUS10Q3MIT2 529 aaKnown RBP14.76□□□□□ -0.05
TUBB3-202ENST00000553656 LEXMQ3ZCV2 418 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 FILIP1LQ4L180 1135 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 SYCE2Q6PIF2 218 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 TRIM65Q6PJ69 517 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 TMC5Q6UXY8 1006 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 ENOSF1Q7L5Y1 443 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 ELMOD1Q8N336 334 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 C12orf76Q8N812 135 aaPredicted RBP14.76□□□□□ -0.05
TUBB3-202ENST00000553656 ATAD1Q8NBU5 361 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 CMASQ8NFW8 434 aaPredicted RBP14.76□□□□□ -0.05
TUBB3-202ENST00000553656 MSLNLQ96KJ4 702 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 RIPOR3Q96MK2 946 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 SEPT5Q99719 369 aaPredicted RBP14.76□□□□□ -0.05
TUBB3-202ENST00000553656 NT5C1AQ9BXI3 368 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 ADAM7Q9H2U9 754 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 CISHQ9NSE2 258 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 HSFX1Q9UBD0 423 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 INSL5Q9Y5Q6 135 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 MYBPHLA2RUH7 354 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 LGALS16A8MUM7 142 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 ATP2C2O75185 946 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 RFPL2O75678 378 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 ATP1A3P13637 1013 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 ZNF445P59923 1031 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 GCNT1Q02742 428 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 TFF2Q03403 129 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 VEPH1Q14D04 833 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 MDH1BQ5I0G3 518 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 ATAT1Q5SQI0 421 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 FAM171BQ6P995 826 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 CYP26C1Q6V0L0 522 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 RRAGAQ7L523 313 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 ACOT1Q86TX2 421 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 LRRTM3Q86VH5 581 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 SMRP1Q8NCR6 262 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 LMO3Q8TAP4 145 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 MYCBPAPQ8TBZ2 947 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 ATXN2LQ8WWM7 1075 aaKnown RBP14.75□□□□□ -0.05
TUBB3-202ENST00000553656 SMG7Q92540 1137 aaKnown RBP14.75□□□□□ -0.05
TUBB3-202ENST00000553656 MYLPFQ96A32 169 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 FUBP3Q96I24 572 aaKnown RBP eCLIP14.75□□□□□ -0.05
TUBB3-202ENST00000553656 PCMTD1Q96MG8 357 aaPredicted RBP14.75□□□□□ -0.05
TUBB3-202ENST00000553656 ARID3AQ99856 593 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 MED10Q9BTT4 135 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 DPEP3Q9H4B8 488 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 ABCB6Q9NP58 842 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 CRTAC1Q9NQ79 661 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 APEX2Q9UBZ4 518 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 SLC27A5Q9Y2P5 690 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 YIPF1Q9Y548 306 aa14.75□□□□□ -0.05
TUBB3-202ENST00000553656 CCL16O15467 120 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 CILPO75339 1184 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 SEC24AO95486 1093 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 SERPINC1P01008 464 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 SLC9A1P19634 815 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 PON1P27169 355 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 MTHFRP42898 656 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 CDR1P51861 262 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 EPHB3P54753 998 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 MFAP3P55082 362 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 MRPS5P82675 430 aaKnown RBP14.74□□□□□ -0.05
TUBB3-202ENST00000553656 UBXN1Q04323 297 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 TWF1Q12792 350 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 ORC1Q13415 861 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 ZNF394Q53GI3 561 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 IQCEQ6IPM2 695 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 PTCRAQ6ISU1 281 aaPredicted RBP14.74□□□□□ -0.05
TUBB3-202ENST00000553656 GPR149Q86SP6 731 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 ARHGEF19Q8IW93 802 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 PCED1BQ96HM7 432 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 NECTIN4Q96NY8 510 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 PKMYT1Q99640 499 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 ANP32EQ9BTT0 268 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 PRKD2Q9BZL6 878 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 ELOVL4Q9GZR5 314 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 HSD3B7Q9H2F3 369 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 UBE2TQ9NPD8 197 aaPredicted RBP14.74□□□□□ -0.05
TUBB3-202ENST00000553656 TMLHEQ9NVH6 421 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 HMGXB4Q9UGU5 601 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 USP15Q9Y4E8 981 aaPredicted RBP14.74□□□□□ -0.05
TUBB3-202ENST00000553656 NME7Q9Y5B8 376 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
TUBB3-202ENST00000553656 MBTPS2O43462 519 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 POU2F2P09086 479 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 HAPLN1P10915 354 aaPredicted RBP14.73□□□□□ -0.05
TUBB3-202ENST00000553656 KRT5P13647 590 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 RPL10AP62906 217 aaKnown RBP14.73□□□□□ -0.05
TUBB3-202ENST00000553656 TAF12Q16514 161 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 CFAP221Q4G0U5 840 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 PHLDB3Q6NSJ2 640 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 CRYBG2Q8N1P7 616 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 JAKMIP2Q96AA8 810 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 TMEM176AQ96HP8 235 aa14.73□□□□□ -0.05
TUBB3-202ENST00000553656 LSM14BQ9BX40 385 aaKnown RBP14.73□□□□□ -0.05
TUBB3-202ENST00000553656 S1PR5Q9H228 398 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms