RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ASIC4Q96FT7 647 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SPZ1Q9BXG8 430 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ANO3Q9BYT9 981 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 DEFB129Q9H1M3 183 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 NOL6Q9H6R4 1146 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 PARVBQ9HBI1 364 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ALG13Q9NP73 1137 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 DMAP1Q9NPF5 467 aaPredicted RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 SACM1LQ9NTJ5 587 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 OLA1Q9NTK5 396 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 HACD3Q9P035 362 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SAMD15Q9P1V8 674 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 PCSK1NQ9UHG2 260 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GTF3C4Q9UKN8 822 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 RLFQ13129 1914 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 MYH4Q9Y623 1939 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 A0A087WWV3 80 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 LRRC37A2A6NM11 1700 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 ZBED4O75132 1171 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 USP2O75604 605 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 FKBP9O95302 570 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 PCNAP12004 261 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 BRAFP15056 766 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 GJB2P29033 226 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 VPS41P49754 854 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 GHRHRQ02643 423 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CLCQ05315 142 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 COX10Q12887 443 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 IKQ13123 557 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 STIM1Q13586 685 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 SUZ12Q15022 739 aaKnown RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 PTPAQ15257 358 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 SURF1Q15526 300 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 NPY5RQ15761 445 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 WDR45BQ5MNZ6 344 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 BEND6Q5SZJ8 279 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 ZNF449Q6P9G9 518 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CRELD2Q6UXH1 353 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 FKBP9P1Q75LS8 142 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 TTC7BQ86TV6 843 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 FAM228AQ86W67 206 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 OSTM1Q86WC4 334 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CCDC83Q8IWF9 413 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CMIPQ8IY22 773 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 AHI1Q8N157 1196 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 SYNE4Q8N205 404 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 NECAB1Q8N987 351 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CCDC63Q8NA47 563 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CNBD1Q8NA66 436 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 NINJ1Q92982 152 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 VPS50Q96JG6 964 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 BTBD6Q96KE9 485 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 OSBPL5Q9H0X9 879 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 DNAJC25Q9H1X3 360 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 UBN1Q9NPG3 1134 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 IL20Q9NYY1 176 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 STK39Q9UEW8 545 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 SEC63Q9UGP8 760 aaKnown RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 ANGEL1Q9UNK9 670 aaKnown RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 XDHP47989 1333 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 PHLPP2Q6ZVD8 1323 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 RASA4BC9J798 803 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 TRIM38O00635 465 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 PENKP01210 267 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 CCNCP24863 283 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CENPAP49450 140 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CCT8P50990 548 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 PPP2R2AP63151 447 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 PHEXP78562 749 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 TTC39AQ5SRH9 613 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 RNF220Q5VTB9 566 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 AGMOQ6ZNB7 445 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 PRR23CQ6ZRP0 262 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 RAPH1Q70E73 1250 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 GATAD2AQ86YP4 633 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 TBC1D10CQ8IV04 446 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 TRIML2Q8N7C3 387 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 NAT16Q8N8M0 369 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 ZBTB34Q8NCN2 500 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 ACMSDQ8TDX5 336 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 CCDC12Q8WUD4 166 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 TMEM174Q8WUU8 243 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 KIFAP3Q92845 792 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 ZNF570Q96NI8 536 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 GSX2Q9BZM3 304 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 FOXP1Q9H334 677 aaPredicted RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 TCF7L2Q9NQB0 619 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 KCTD5Q9NXV2 234 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 EIF2B4Q9UI10 523 aaKnown RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 AP4E1Q9UPM8 1137 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 PCDHA8Q9Y5H6 950 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 HEY1Q9Y5J3 304 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 ZNF532Q9HCE3 1301 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 SIP14410 1827 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 TMCC2O75069 709 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 SOD2P04179 222 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 IGHMBP2P38935 993 aaKnown RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 RPS8P62241 208 aaKnown RBP4.25□□□□□ -1.73
RDH11-204ENST00000553578 AP1B1Q10567 949 aa4.25□□□□□ -1.73
RDH11-204ENST00000553578 AP3B2Q13367 1082 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms