RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MIA3Q5JRA6 1907 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 NUP210Q8TEM1 1887 aaPredicted RBP19.56■□□□□ 0.72
SHMT2-206ENST00000553529 EXOC3O60645 756 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 CACNA2D1P54289 1103 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 ANGPT1Q15389 498 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 DUOXA2Q1HG44 320 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 WDR44Q5JSH3 913 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 KRBA2Q6ZNG9 492 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 LIMS2Q7Z4I7 341 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 FRMD5Q7Z6J6 570 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 ARID3BQ8IVW6 561 aaPredicted RBP19.55■□□□□ 0.72
SHMT2-206ENST00000553529 MYLPFQ96A32 169 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 DDX23Q9BUQ8 820 aaKnown RBP19.55■□□□□ 0.72
SHMT2-206ENST00000553529 TMEM30AQ9NV96 361 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 KIF26AQ9ULI4 1882 aaPredicted RBP19.55■□□□□ 0.72
SHMT2-206ENST00000553529 SIT1Q9Y3P8 196 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 PCDHB5Q9Y5E4 795 aa19.55■□□□□ 0.72
SHMT2-206ENST00000553529 DMDP11532 3685 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 PATJQ8NI35 1801 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 ARNTLO00327 626 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 KIAA0391O15091 583 aaKnown RBP19.54■□□□□ 0.72
SHMT2-206ENST00000553529 MICAL2O94851 1124 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 VNN1O95497 513 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 HOXC13P31276 330 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 CDH8P55286 799 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 C1orf220Q5T0J3 134 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 PHLDB3Q6NSJ2 640 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 HS2ST1Q7LGA3 356 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 C12orf56Q8IXR9 622 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 TOP6BLQ8N6T0 577 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 EEF2KMTQ96G04 330 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 MMS19Q96T76 1030 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 SYT15Q9BQS2 421 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 SLC46A2Q9BY10 475 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 SDCBP2Q9H190 292 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 XYLT2Q9H1B5 865 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 SMYD3Q9H7B4 428 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 BRD9Q9H8M2 597 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 DMAC2Q9NW81 257 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 CCL26Q9Y258 94 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 DENND4CQ5VZ89 1909 aa19.54■□□□□ 0.72
SHMT2-206ENST00000553529 PTPRDP23468 1912 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 KANSL1LA0AUZ9 987 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 ZNF202O95125 648 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 NR3C1P04150 777 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 TSPY1Q01534 308 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 ORC1Q13415 861 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 FZD5Q13467 585 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 PNOCQ13519 176 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 TXNDC8Q6A555 127 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 SCARA5Q6ZMJ2 495 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 ASCL5Q7RTU5 278 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 SCN4BQ8IWT1 228 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 DCP1BQ8IZD4 617 aaKnown RBP19.53■□□□□ 0.72
SHMT2-206ENST00000553529 MAML2Q8IZL2 1156 aaPredicted RBP19.53■□□□□ 0.72
SHMT2-206ENST00000553529 SPPL2BQ8TCT7 592 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 FNBP1Q96RU3 617 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 ACBD6Q9BR61 282 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 TRMT61BQ9BVS5 477 aaKnown RBP19.53■□□□□ 0.72
SHMT2-206ENST00000553529 LTB4R2Q9NPC1 389 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 NXF1Q9UBU9 619 aaKnown RBP19.53■□□□□ 0.72
SHMT2-206ENST00000553529 NDRG2Q9UN36 371 aaKnown RBP19.53■□□□□ 0.72
SHMT2-206ENST00000553529 USP34Q70CQ2 3546 aa19.53■□□□□ 0.72
SHMT2-206ENST00000553529 A0A1W2PQ27 194 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 A0A1W2PQ64 194 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 A0A1W2PQD8 194 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 FAM170BA6NMN3 283 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 F11P03951 625 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 PAX3P23760 479 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 TUFMP49411 452 aaKnown RBP19.52■□□□□ 0.72
SHMT2-206ENST00000553529 NLRP12P59046 1061 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 USP46P62068 366 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 MYL7Q01449 175 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 TNK2Q07912 1038 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 SPOPLQ6IQ16 392 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 SLC22A12Q96S37 553 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 KIAA1586Q9HCI6 787 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 R4GN57 208 aa19.52■□□□□ 0.72
SHMT2-206ENST00000553529 GREB1Q4ZG55 1949 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 SLC38A8A6NNN8 435 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 CLDN5O00501 218 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 TRIM49P0CI25 452 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 TRIM49CP0CI26 452 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 PSMC3P17980 439 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 BDNFP23560 247 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 MYO1EQ12965 1108 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 VEPH1Q14D04 833 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 SURF1Q15526 300 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 WDR72Q3MJ13 1102 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 MDH1BQ5I0G3 518 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 CEP135Q66GS9 1140 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 FAM171BQ6P995 826 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 ZNF687Q8N1G0 1237 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 TMEM86AQ8N2M4 240 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 MAB21L3Q8N8X9 362 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 LEMD2Q8NC56 503 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 PARD3BQ8TEW8 1205 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 PCED1BQ96HM7 432 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 PRRX2Q99811 253 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 TRPV4Q9HBA0 871 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms