RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 RFC1P35251 1148 aaPredicted RBP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 PRKCZQ05513 592 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 NFX1Q12986 1120 aaKnown RBP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 PCBP1Q15365 356 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 ACOT1Q86TX2 421 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 OR6B3Q8NGW1 331 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 JOSD2Q8TAC2 188 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 LRRC45Q96CN5 670 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 FAXDC2Q96IV6 333 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 MRPL45Q9BRJ2 306 aaKnown RBP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 SPC25Q9HBM1 224 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 ATP8A1Q9Y2Q0 1164 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 TCRBV5S1A1TA0A578 114 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 GOLGA6CA6NDK9 693 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 OPA1O60313 960 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 GOLGA6DP0CG33 693 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 CYBAP13498 195 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 MAN1A1P33908 653 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 HSPA9P38646 679 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 PTGIRP43119 386 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 LMAN1P49257 510 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 CRYBB1P53674 252 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 TAP1Q03518 808 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 DHX9Q08211 1270 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 INCA1Q0VD86 236 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 PDCLQ13371 301 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 TRIP13Q15645 432 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 SMTNL2Q2TAL5 461 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 NBPF20Q3BBV1 942 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 ALS2CLQ60I27 953 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 DUPD1Q68J44 220 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 TXNRD3NBQ6F5E7 133 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 KATNAL2Q8IYT4 538 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 MREGQ8N565 214 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 EIF1ADQ8N9N8 165 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 FBXO25Q8TCJ0 367 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 IPO4Q8TEX9 1081 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 SEC14L1Q92503 715 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 OSBPL8Q9BZF1 889 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 CENPHQ9H3R5 247 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 GOLGA6AQ9NYA3 693 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 CNTN3Q9P232 1028 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 UBQLN1Q9UMX0 589 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 PLAAQ9Y263 795 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 R3HDM2Q9Y2K5 976 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 SMIM28A0A1B0GU29 152 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 LRRD1A4D1F6 860 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 PODXLO00592 558 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 HCRTO43612 131 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 RARBP10826 455 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 KRT10P13645 584 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 HSD17B3P37058 310 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 CETN2P41208 172 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 RPL21P46778 160 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 FNTAP49354 379 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 VPS41P49754 854 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 RGS7P49802 495 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 KRT17Q04695 432 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 PDE4CQ08493 712 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 PIGHQ14442 188 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 CYP1B1Q16678 543 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 GOLGA7BQ2TAP0 167 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM102AQ5T9C2 384 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 C9orf57Q5W0N0 161 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 XYLT1Q86Y38 959 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 OR2W6PQ8NHA6 318 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 EXD1Q8NHP7 514 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 MAIP1Q8WWC4 291 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 MTG1Q9BT17 334 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 ZWILCHQ9H900 591 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 GPBP1L1Q9HC44 474 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 ASIC3Q9UHC3 531 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 DERAQ9Y315 318 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 IPPQ9Y573 584 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 CDY2AQ9Y6F7 541 aa9.59□□□□□ -0.87
RAB3IP-218ENST00000553099 A8MXQ7 604 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 BHMG1C9JSJ3 638 aaPredicted RBP9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 GRAP2O75791 330 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 HMGCRP04035 888 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 GPD2P43304 727 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 TM4SF4P48230 202 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 CNGA2Q16280 664 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 DNAJC21Q5F1R6 531 aaKnown RBP9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 KCNT1Q5JUK3 1230 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 FBXO47Q5MNV8 452 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 PPP1R15BQ5SWA1 713 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 CEP85LQ5SZL2 805 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 KCTD16Q68DU8 428 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 TAF2Q6P1X5 1199 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 TMC3Q7Z5M5 1100 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 ANKS1BQ7Z6G8 1248 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 FAM228AQ86W67 206 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 C12orf50Q8NA57 414 aaPredicted RBP9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 RUNDC3BQ96NL0 473 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 LRRC19Q9H756 370 aa9.59□□□□□ -0.88
RAB3IP-218ENST00000553099 ERICH4A6NGS2 130 aa9.58□□□□□ -0.88
RAB3IP-218ENST00000553099 TMEM88BA6NKF7 163 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms