RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TDRD5Q8NAT2 981 aaKnown RBP10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 B3GALNT2Q8NCR0 500 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 TAS1R2Q8TE23 839 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 E2F7Q96AV8 911 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 BCO2Q9BYV7 579 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 COMMD8Q9NX08 183 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 NFE2L3Q9Y4A8 694 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 INSL5Q9Y5Q6 135 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 SCN1AP35498 2009 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 MTMR11A4FU01 709 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 VNN1O95497 513 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 TPM3P06753 285 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 FSHRP23945 695 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 DDX6P26196 483 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 MFAP3P55082 362 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 SNX16P57768 344 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 DUSP4Q13115 394 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 EXOC3L4Q17RC7 722 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 MGAT5BQ3V5L5 792 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 TCP11X2Q5H9J9 407 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 C1orf220Q5T0J3 134 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 RNF19BQ6ZMZ0 732 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 ZDHHC14Q8IZN3 488 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 EHBP1Q8NDI1 1231 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 FAM200AQ8TCP9 573 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 PLEKHO2Q8TD55 490 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 PSMG2Q969U7 264 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 EEF2KMTQ96G04 330 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 SPATA17Q96L03 361 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 UHRF1Q96T88 793 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 TUBGCP2Q9BSJ2 902 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 MMRN2Q9H8L6 949 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 ABI2Q9NYB9 513 aaPredicted RBP10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 IGSF9Q9P2J2 1179 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 POLIQ9UNA4 740 aa10.94□□□□□ -0.66
TRAFD1-208ENST00000552890 KCNJ18B7U540 433 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 GOLGA6L19H0YKK7 550 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 PES1O00541 588 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 RTN3O95197 1032 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 PAEPP09466 180 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 PDGFRBP09619 1106 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 HAPLN1P10915 354 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 ALADP13716 330 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 ZNF165P49910 485 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 BPIFB4P59827 614 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 TFF2Q03403 129 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 DLX2Q07687 328 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 TWF1Q12792 350 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 CUL2Q13617 745 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 KCNJ12Q14500 433 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 VWA3BQ502W6 1294 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 PDZD4Q76G19 769 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 KBTBD7Q8WVZ9 684 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 SMARCD1Q96GM5 515 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 SEPT5Q99719 369 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 NDST4Q9H3R1 872 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 FBXO44Q9H4M3 255 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 PNPLA8Q9NP80 782 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 TMEM63CQ9P1W3 806 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 HESX1Q9UBX0 185 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 GTF3C4Q9UKN8 822 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 MRPS23Q9Y3D9 190 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 YIPF1Q9Y548 306 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 VWA8A3KMH1 1905 aa10.93□□□□□ -0.66
TRAFD1-208ENST00000552890 LRRC10BA6NIK2 292 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 ADAM12O43184 909 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 MED7O43513 233 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CILPO75339 1184 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CCDC172P0C7W6 258 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 SPATA31D3P0C874 917 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 SSTR3P32745 418 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 GRIK1P39086 918 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 ASPAP45381 313 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 EPHA5P54756 1037 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CYP27A1Q02318 531 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CLUL1Q15846 466 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 MEA1Q16626 185 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CBWD6Q4V339 395 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CBWD3Q5JTY5 395 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CBWD5Q5RIA9 395 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 RSPO2Q6UXX9 243 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 SPATA31D4Q6ZUB0 917 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 GJD3Q8N144 294 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 PPM1KQ8N3J5 372 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 ATAD1Q8NBU5 361 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 PDZD8Q8NEN9 1154 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 OR10T2Q8NGX3 314 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 OVCA2Q8WZ82 227 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 IQCDQ96DY2 449 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 TRMT2BQ96GJ1 504 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 TMEM176AQ96HP8 235 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 C8orf48Q96LL4 319 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 MED10Q9BTT4 135 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 UBXN6Q9BZV1 441 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 DMAP1Q9NPF5 467 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CISHQ9NSE2 258 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 TMEM51Q9NW97 253 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms