RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SPAG1Q07617 926 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 CYP24A1Q07973 514 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 ADCY1Q08828 1119 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 SPEM2Q0P670 501 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 BIRC3Q13489 604 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 RAB33AQ14088 237 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 NAB2Q15742 525 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 ENOX2Q16206 610 aaKnown RBP12.24□□□□□ -0.45
TMEM116-218ENST00000552839 LPAL2Q16609 132 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 FOXR2Q6PJQ5 311 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 FAM200AQ8TCP9 573 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 FAM126AQ9BYI3 521 aaPredicted RBP12.24□□□□□ -0.45
TMEM116-218ENST00000552839 THAP9Q9H5L6 903 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 ASB7Q9H672 318 aa12.24□□□□□ -0.45
TMEM116-218ENST00000552839 UBQLN1Q9UMX0 589 aaKnown RBP12.24□□□□□ -0.45
TMEM116-218ENST00000552839 ACACBO00763 2458 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 EPG5Q9HCE0 2579 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 MAPK13O15264 365 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 AKAP3O75969 853 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 ADRB2P07550 413 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 RHOP08100 348 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 KRT19P08727 400 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
TMEM116-218ENST00000552839 IGFBP6P24592 240 aaPredicted RBP12.23□□□□□ -0.45
TMEM116-218ENST00000552839 CASP4P49662 377 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 VAMP7P51809 220 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 POU5F1Q01860 360 aaKnown RBP12.23□□□□□ -0.45
TMEM116-218ENST00000552839 CETN1Q12798 172 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 BFSP1Q12934 665 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 TRPC3Q13507 836 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 PSMD6Q15008 389 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 SLC5A9Q2M3M2 681 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 HSP90AA4PQ58FG1 418 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 TANGO2Q6ICL3 276 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 JADE1Q6IE81 842 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 FILIP1Q7Z7B0 1213 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 NT5DC4Q86YG4 428 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 ZSWIM2Q8NEG5 633 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 ENOX1Q8TC92 643 aaKnown RBP12.23□□□□□ -0.45
TMEM116-218ENST00000552839 TSPAN18Q96SJ8 248 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 CGRRF1Q99675 332 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 BPIFA3Q9BQP9 254 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 IMPG2Q9BZV3 1241 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 PDE11AQ9HCR9 933 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 CNTN3Q9P232 1028 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 NDRG2Q9UN36 371 aaKnown RBP12.23□□□□□ -0.45
TMEM116-218ENST00000552839 MRPS17Q9Y2R5 130 aaKnown RBP12.23□□□□□ -0.45
TMEM116-218ENST00000552839 DERAQ9Y315 318 aa12.23□□□□□ -0.45
TMEM116-218ENST00000552839 MRPS23Q9Y3D9 190 aaKnown RBP12.23□□□□□ -0.45
TMEM116-218ENST00000552839 PDCD11Q14690 1871 aaKnown RBP12.23□□□□□ -0.45
TMEM116-218ENST00000552839 MAP1BP46821 2468 aaKnown RBP12.22□□□□□ -0.45
TMEM116-218ENST00000552839 F5P12259 2224 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 SMIM28A0A1B0GU29 152 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 NRG2O14511 850 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-218ENST00000552839 NFICP08651 508 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 AP3M2P53677 418 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 ZNF445P59923 1031 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 ELAVL2Q12926 359 aaKnown RBP12.22□□□□□ -0.45
TMEM116-218ENST00000552839 SLC10A6Q3KNW5 377 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 PPM1JQ5JR12 505 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 LMBRD2Q68DH5 695 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-218ENST00000552839 PDXDC1Q6P996 788 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 WDR49Q8IV35 697 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 NETO1Q8TDF5 533 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 DNASE1L2Q92874 299 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 ZNF560Q96MR9 790 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
TMEM116-218ENST00000552839 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 DMAC2Q9NW81 257 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 GDE1Q9NZC3 331 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 MTRRQ9UBK8 725 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 RAB23Q9ULC3 237 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 C2CD2Q9Y426 696 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 NUB1Q9Y5A7 615 aa12.22□□□□□ -0.45
TMEM116-218ENST00000552839 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.22□□□□□ -0.45
TMEM116-218ENST00000552839 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-218ENST00000552839 TTC26A0AVF1 554 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 KCNJ18B7U540 433 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 SLC30A4O14863 429 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 IKBKBO14920 756 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 FAM189A1O60320 539 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 TRIM49P0CI25 452 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 TRIM49CP0CI26 452 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 KCNE1P15382 129 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 CEBPBP17676 345 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 FGFR3P22607 806 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 FCARP24071 287 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 EEF1GP26641 437 aaKnown RBP12.21□□□□□ -0.45
TMEM116-218ENST00000552839 PIK3CAP42336 1068 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 MXI1P50539 228 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 NRLP54845 237 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 GRM2Q14416 872 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 LAIR1Q6GTX8 287 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 CRELD2Q6UXH1 353 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-218ENST00000552839 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-218ENST00000552839 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms