RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TBCAO75347 108 aaKnown RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 F11P03951 625 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 KRT18P05783 430 aaKnown RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 DDX6P26196 483 aaKnown RBP eCLIP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 ADSSP30520 456 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 DDIT3P35638 169 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 NLRP12P59046 1061 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 KRT85P78386 507 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 KARSQ15046 597 aaKnown RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 ZC2HC1CQ53FD0 456 aaPredicted RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 HEATR6Q6AI08 1181 aaKnown RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 ZNF720Q7Z2F6 126 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 DCP1BQ8IZD4 617 aaKnown RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 CHFRQ96EP1 664 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 GCNAQ96QF7 691 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 PYM1Q9BRP8 204 aaKnown RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 STRA6Q9BX79 667 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 SMG9Q9H0W8 520 aaKnown RBP12.77□□□□□ -0.37
CKAP4-202ENST00000552828 HPS4Q9NQG7 708 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 GKN1Q9NS71 199 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 TCHHQ07283 1943 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 OTOL1A6NHN0 477 aaPredicted RBP12.76□□□□□ -0.37
CKAP4-202ENST00000552828 KPNA7A9QM74 516 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 EXTL3O43909 919 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 GDF9O60383 454 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 CUTAO60888 179 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 PPP1R37O75864 691 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 IL18RAPO95256 599 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 HOXC13P31276 330 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 ME1P48163 572 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 LIMK1P53667 647 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 RUNX3Q13761 415 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 ZNF268Q14587 947 aaPredicted RBP12.76□□□□□ -0.37
CKAP4-202ENST00000552828 TAF12Q16514 161 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 PPM1JQ5JR12 505 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 RRAGBQ5VZM2 374 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 CEP68Q76N32 757 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 MON1AQ86VX9 555 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 EFCAB13Q8IY85 973 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 GIPC2Q8TF65 315 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 GAB3Q8WWW8 586 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 LARP4BQ92615 738 aaKnown RBP12.76□□□□□ -0.37
CKAP4-202ENST00000552828 USP13Q92995 863 aaPredicted RBP12.76□□□□□ -0.37
CKAP4-202ENST00000552828 HVCN1Q96D96 273 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 KIF9Q9HAQ2 790 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 TDP1Q9NUW8 608 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 CCL26Q9Y258 94 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 PCDHB5Q9Y5E4 795 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
CKAP4-202ENST00000552828 TM4SF5O14894 197 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 ATG13O75143 517 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 AKAP3O75969 853 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 MYH11P35749 1972 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 AVPR1AP37288 418 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 PNPLA4P41247 253 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 AMPD2Q01433 879 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.37
CKAP4-202ENST00000552828 POSTNQ15063 836 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 NFE2Q16621 373 aaPredicted RBP12.75□□□□□ -0.37
CKAP4-202ENST00000552828 SV2CQ496J9 727 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 PKN3Q6P5Z2 889 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 CACNA2D4Q7Z3S7 1137 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 CAMKK1Q8N5S9 505 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 MAB21L3Q8N8X9 362 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 NUP210Q8TEM1 1887 aaPredicted RBP12.75□□□□□ -0.37
CKAP4-202ENST00000552828 LEO1Q8WVC0 666 aaPredicted RBP12.75□□□□□ -0.37
CKAP4-202ENST00000552828 DDX1Q92499 740 aaKnown RBP12.75□□□□□ -0.37
CKAP4-202ENST00000552828 ACBD6Q9BR61 282 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 ZHX3Q9H4I2 956 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 ABCB6Q9NP58 842 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 TMLHEQ9NVH6 421 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 ABI2Q9NYB9 513 aaPredicted RBP12.75□□□□□ -0.37
CKAP4-202ENST00000552828 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
CKAP4-202ENST00000552828 TSC2P49815 1807 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 RPP40O75818 363 aaKnown RBP12.74□□□□□ -0.37
CKAP4-202ENST00000552828 KRT37O76014 449 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 EPN2O95208 641 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 ZNF806P0C7X5 589 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 CSH1P0DML2 217 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 CSH2P0DML3 217 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 CDR1P51861 262 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 TSPY1Q01534 308 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 PDGFRLQ15198 375 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 PLA2G2CQ5R387 149 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 PDCL2Q8N4E4 241 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 RIN3Q8TB24 985 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 POMGNT1Q8WZA1 660 aa12.74□□□□□ -0.37
CKAP4-202ENST00000552828 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
CKAP4-202ENST00000552828 ZC3H10Q96K80 434 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms