RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 MBD6Q96DN6 1003 aa4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 MAELQ96JY0 434 aaKnown RBP4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 KLHL32Q96NJ5 620 aa4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 FMNL2Q96PY5 1086 aa4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 PRPF18Q99633 342 aaKnown RBP4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 TWSG1Q9GZX9 223 aa4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 TP63Q9H3D4 680 aaPredicted RBP4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 IL23AQ9NPF7 189 aa4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 MRPS18AQ9NVS2 196 aaKnown RBP4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 CA14Q9ULX7 337 aa4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 MTO1Q9Y2Z2 717 aaKnown RBP4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 HS3ST4Q9Y661 456 aa4.71□□□□□ -1.66
LSM6P2-201ENST00000552208 A6NLC8 198 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 TBKBP1A7MCY6 615 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 B5MCH6 92 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 MYO1CO00159 1063 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 RAB27BO00194 218 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 MATN2O00339 956 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 AGFG2O95081 481 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 GLP2RO95838 553 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 IFIT1P09914 478 aaKnown RBP4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 CYP2C9P11712 490 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 ALAS1P13196 640 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 IDEP14735 1019 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 PECAM1P16284 738 aaPredicted RBP4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 LIFRP42702 1097 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 TOB1P50616 345 aaPredicted RBP4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 CCR5P51681 352 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 NR1H2P55055 460 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 NPEPPSP55786 919 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 CAP1Q01518 475 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 ARHGEF7Q14155 803 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 VWA3BQ502W6 1294 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 FAAH2Q6GMR7 532 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 C16orf54Q6UWD8 224 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 GATAD2AQ86YP4 633 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 SLC44A2Q8IWA5 706 aaPredicted RBP4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 TMTC2Q8N394 836 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 AOPEPQ8N6M6 819 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 THAP4Q8WY91 577 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 RAPGEF4Q8WZA2 1011 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 SDCCAG3Q96C92 435 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 TMEM168Q9H0V1 697 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 EPB41L4BQ9H329 900 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 BLOC1S4Q9NUP1 217 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 TMEM160Q9NX00 188 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 BCCIPQ9P287 314 aaKnown RBP eCLIP4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 HESX1Q9UBX0 185 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 LPAR3Q9UBY5 353 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 HDAC9Q9UKV0 1011 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 ATP11BQ9Y2G3 1177 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 CARMIL2Q6F5E8 1435 aa4.7□□□□□ -1.66
LSM6P2-201ENST00000552208 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 H7C4K7 107 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 M0QYG6 137 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 PCDH17O14917 1159 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 DCLK1O15075 740 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 DHHO43323 396 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 SOAT2O75908 522 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 STC2O76061 302 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 ACTL6BO94805 426 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 KIF20AO95235 890 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 POMCP01189 267 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 XRCC6P12956 609 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 GYS1P13807 737 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 JUPP14923 745 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 MST1P26927 711 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 SLC5A2P31639 672 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 ATICP31939 592 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 NSUN2Q08J23 767 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 CUL4BQ13620 913 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 BOP1Q14137 746 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 RNF151Q2KHN1 245 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 ADCK5Q3MIX3 580 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 TRIM60Q495X7 471 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 PLA1AQ53H76 456 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 GPATCH4Q5T3I0 446 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 L1TD1Q5T7N2 865 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 MRNIPQ6NTE8 343 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 KLHL17Q6TDP4 642 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 PRR23BQ6ZRT6 265 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 HEATR4Q86WZ0 1026 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 TXNDC5Q8NBS9 432 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 FAM46DQ8NEK8 389 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 SCAMP5Q8TAC9 235 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 SNRNP27Q8WVK2 155 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 HTRA1Q92743 480 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 HDAC2Q92769 488 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 PPP1R9BQ96SB3 815 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 DIRC2Q96SL1 478 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 RBM15Q96T37 977 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 LSM14BQ9BX40 385 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 SIK2Q9H0K1 926 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 FAM83DQ9H4H8 585 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 NSUN3Q9H649 340 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 AGO3Q9H9G7 860 aaKnown RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 BARX1Q9HBU1 254 aaPredicted RBP4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 ZBTB26Q9HCK0 441 aa4.69□□□□□ -1.66
LSM6P2-201ENST00000552208 SMC4Q9NTJ3 1288 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms