RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 BRAPQ7Z569 592 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 PDCL2Q8N4E4 241 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 FAM160A2Q8N612 972 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 C1orf127Q8N9H9 656 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 CXorf38Q8TB03 319 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 SPPL2BQ8TCT7 592 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 EBF3Q9H4W6 596 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 L1RE1Q9UN81 338 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 AGAP1Q9UPQ3 857 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 EML5Q05BV3 1969 aa19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 VPS37CA5D8V6 355 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 PRPF40AO75400 957 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 C1orf228Q6PIY5 440 aa19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 OSTM1Q86WC4 334 aa19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 RTKNQ9BST9 563 aa19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 MRPL44Q9H9J2 332 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 MAGED2Q9UNF1 606 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 PCDHB5Q9Y5E4 795 aa19.28■□□□□ 0.68
PRPF40B-215ENST00000551418 A0A087X0B3 334 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 TADA3O75528 432 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 ITGB3P05106 788 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 SDHBP21912 280 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 CYP2F1P24903 491 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 PLCB2Q00722 1185 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 CEBPZQ03701 1054 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 RUNX3Q13761 415 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 CCDC6Q16204 474 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 SV2CQ496J9 727 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 DCP1BQ8IZD4 617 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 C2orf15Q8WU43 125 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 GCNAQ96QF7 691 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 CYP2S1Q96SQ9 504 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 PKMYT1Q99640 499 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 CBWD1Q9BRT8 395 aa19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 THG1LQ9NWX6 298 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-215ENST00000551418 ANAPC1Q9H1A4 1944 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 IL18RAPO95256 599 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 EGFP01133 1207 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 ABCD1P33897 745 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 POU5F1Q01860 360 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 POSTNQ15063 836 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 TMEM196Q5HYL7 178 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 L1TD1Q5T7N2 865 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 RRAGBQ5VZM2 374 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 PRR23CQ6ZRP0 262 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 CEP68Q76N32 757 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 WDR5BQ86VZ2 330 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 BRSK2Q8IWQ3 736 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 HVCN1Q96D96 273 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 ACCSQ96QU6 501 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 SLC22A12Q96S37 553 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 PCIF1Q9H4Z3 704 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 PDE11AQ9HCR9 933 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 TDP1Q9NUW8 608 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 SIX4Q9UIU6 781 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 GTF3C4Q9UKN8 822 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 SPAG17Q6Q759 2223 aa19.26■□□□□ 0.67
PRPF40B-215ENST00000551418 AXIN1O15169 862 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 GCNT3O95395 438 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 HOXA6P31267 233 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 CNR2P34972 360 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 AVPR1AP37288 418 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 SMARCB1Q12824 385 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 BFSP1Q12934 665 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 RESTQ13127 1097 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 CSRP2Q16527 193 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 LMBRD2Q68DH5 695 aaPredicted RBP19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 MON1AQ86VX9 555 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 CSGALNACT2Q8N6G5 542 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 GLIS3Q8NEA6 775 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 NOC3LQ8WTT2 800 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 DDX43Q9NXZ2 648 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 STK17AQ9UEE5 414 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 SRPRBQ9Y5M8 271 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 CACNA1BQ00975 2339 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 EPG5Q9HCE0 2579 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 ACACBO00763 2458 aa19.25■□□□□ 0.67
PRPF40B-215ENST00000551418 GREB1Q4ZG55 1949 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 TRDMT1O14717 391 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 SLC30A4O14863 429 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 ATP2C2O75185 946 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 PRPF6O94906 941 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 IDEP14735 1019 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 GALK1P51570 392 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 TSPY1Q01534 308 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 CUL4AQ13619 759 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 SF3A2Q15428 464 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 INTS6LQ5JSJ4 861 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 SV2BQ7L1I2 683 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 NT5DC4Q86YG4 428 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 SYNPOQ8N3V7 929 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 TTC16Q8NEE8 873 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 NETO1Q8TDF5 533 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 EZH1Q92800 747 aaPredicted RBP19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 ZNF560Q96MR9 790 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 RXFP3Q9NSD7 469 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 RBAKQ9NYW8 714 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms