RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 METTL23Q86XA0 190 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 PSPC1Q8WXF1 523 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 EFCAB1Q9HAE3 211 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 MYOM1P52179 1685 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 E2F8A0AVK6 867 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 TPST1O60507 370 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 SGPL1O95470 568 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 ALBP02768 609 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 ASNSP08243 561 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 FAM58BPP0C7Q3 252 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 ACOT2P49753 483 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 IMPG1Q17R60 797 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 BNC2Q6ZN30 1099 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 ZNF662Q6ZS27 426 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 SLC25A41Q8N5S1 370 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 ILKAPQ9H0C8 392 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 TPP2P29144 1249 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 CLK1P49759 484 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 VCPP55072 806 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 TNFAIP2Q03169 654 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 NCOA4Q13772 614 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 KLHL25Q9H0H3 589 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 PCDHA10Q9Y5I2 948 aa16.47■□□□□ 0.23
RBFOX1-212ENST00000550418 HLA-DRAP01903 254 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 KCNA2P16389 499 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 PKN1Q16512 942 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 WDR72Q3MJ13 1102 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 CKAP2Q8WWK9 683 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 ULK4Q96C45 1275 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 ZNF341Q9BYN7 854 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 CNGA2Q16280 664 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 LPCAT2Q7L5N7 544 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 MICU2Q8IYU8 434 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 IQCKQ8N0W5 287 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 RUBCNLQ9H714 662 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 SOX13Q9UN79 622 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 SNX13Q9Y5W8 968 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 FLT1P17948 1338 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 GLRA3O75311 464 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 POLBP06746 335 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 GYS1P13807 737 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 PTDSS1P48651 473 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 ADARP55265 1226 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 WDR59Q6PJI9 974 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 FAM167AQ96KS9 214 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 A1CFQ9NQ94 594 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 APPL1Q9UKG1 709 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 DNAJC16Q9Y2G8 782 aa16.46■□□□□ 0.23
RBFOX1-212ENST00000550418 AKAP3O75969 853 aa16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 CDH2P19022 906 aaPredicted RBP16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 CRKP46108 304 aa16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 SEC23AQ15436 765 aa16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 AASDHQ4L235 1098 aaPredicted RBP16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 PCNX4Q63HM2 1172 aa16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 TMCO5AQ8N6Q1 288 aa16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 ZNF483Q8TF39 744 aaPredicted RBP16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 FEM1BQ9UK73 627 aa16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 KDM6AO15550 1401 aaPredicted RBP16.46■□□□□ 0.22
RBFOX1-212ENST00000550418 GTPBP10A4D1E9 387 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 ZNF189O75820 626 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 PSMG1O95456 288 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 C16orf72Q14CZ0 275 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 EARS2Q5JPH6 523 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 PLEKHA7Q6IQ23 1121 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 RCCD1A6NED2 376 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 PIK3CDO00329 1044 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 GFAPP14136 432 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 PPARGP37231 505 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 RAP1GDS1P52306 607 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 OTUD4Q01804 1114 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 TMEM139Q8IV31 216 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 ZFRQ96KR1 1074 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 SH3GL2Q99962 352 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 MST1RQ04912 1400 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 SERPINB5P36952 375 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 SNRPFP62306 86 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 KCNA1Q09470 495 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 PDAP1Q13442 181 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 CCDC85BQ15834 202 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 GADL1Q6ZQY3 521 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 SLC26A11Q86WA9 606 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 GDPD5Q8WTR4 605 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 PI4K2AQ9BTU6 479 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 TNFAIP8O95379 198 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 HADHAP40939 763 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 RGS2P41220 211 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 C6orf10Q5SRN2 563 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 DEFB107AQ8IZN7 70 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 FAM210AQ96ND0 272 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 NINJ2Q9NZG7 142 aa16.45■□□□□ 0.22
RBFOX1-212ENST00000550418 ATP6V1C1P21283 382 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 XRCC4Q13426 336 aa16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 DCTN2Q13561 401 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-212ENST00000550418 SLC45A4Q5BKX6 768 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms