RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CHRDQ9H2X0 955 aa11.68□□□□□ -0.54
VTI1BP3-201ENST00000550220 AGPAT3Q9NRZ7 376 aa11.68□□□□□ -0.54
VTI1BP3-201ENST00000550220 ZSCAN32Q9NX65 697 aa11.68□□□□□ -0.54
VTI1BP3-201ENST00000550220 EHD2Q9NZN4 543 aa11.68□□□□□ -0.54
VTI1BP3-201ENST00000550220 USP25Q9UHP3 1055 aa11.68□□□□□ -0.54
VTI1BP3-201ENST00000550220 RCOR1Q9UKL0 485 aa11.68□□□□□ -0.54
VTI1BP3-201ENST00000550220 PCDHA7Q9UN72 937 aa11.68□□□□□ -0.54
VTI1BP3-201ENST00000550220 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
VTI1BP3-201ENST00000550220 ARNTLO00327 626 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 TNNI1P19237 187 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 CCR3P51677 355 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 FOXK2Q01167 660 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 PSMD2Q13200 908 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 FZD5Q13467 585 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 SNRNP35Q16560 246 aaKnown RBP11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 RESP18Q5W5W9 173 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 VSTM1Q6UX27 236 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 CBWD2Q8IUF1 395 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 SPATA2LQ8IUW3 424 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 C12orf56Q8IXR9 622 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 ADGRF2Q8IZF7 708 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 MAML2Q8IZL2 1156 aaPredicted RBP11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 CMTM8Q8IZV2 173 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 SYNPOQ8N3V7 929 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 TTC9BQ8N6N2 239 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 FSIP1Q8NA03 581 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 XXYLT1Q8NBI6 393 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 ZSWIM2Q8NEG5 633 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 GIPC2Q8TF65 315 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 RUBCNQ92622 972 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 MRPS31Q92665 395 aaKnown RBP11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 SECISBP2LQ93073 1101 aaKnown RBP11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 MYRFLQ96LU7 910 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 PI4K2AQ9BTU6 479 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 MKNK1Q9BUB5 465 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 SLC46A2Q9BY10 475 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 FGFBP2Q9BYJ0 223 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 KIF9Q9HAQ2 790 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 LMAN1LQ9HAT1 526 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 IL21Q9HBE4 155 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 SIX4Q9UIU6 781 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 CDH9Q9ULB4 789 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 R4GN57 208 aa11.67□□□□□ -0.54
VTI1BP3-201ENST00000550220 MYBPHLA2RUH7 354 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 SHISA7A6NL88 538 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 NRG2O14511 850 aaPredicted RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 F11P03951 625 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 SLFN14P0C7P3 912 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 HMGA1P17096 107 aaKnown RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 CCNE1P24864 410 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 HOXD13P35453 343 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 MAGEA11P43364 429 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 PDE6CP51160 858 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 AP3M2P53677 418 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 WNT7BP56706 349 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 NLRP12P59046 1061 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 EHHADHQ08426 723 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 MTAPQ13126 283 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 PSMD6Q15008 389 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 KNOP1Q1ED39 458 aaKnown RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 BMT2Q1RMZ1 405 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 SOWAHAQ2M3V2 549 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 FOXD4L5Q5VV16 416 aaPredicted RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 CC2D1AQ6P1N0 951 aaPredicted RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 FAM171BQ6P995 826 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 TRAPPC11Q7Z392 1133 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 LIMS2Q7Z4I7 341 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 MON1AQ86VX9 555 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 ZBTB44Q8NCP5 570 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 SCFD1Q8WVM8 642 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 FOXD4L4Q8WXT5 416 aaPredicted RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 NELL1Q92832 810 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 TRMT2BQ96GJ1 504 aaKnown RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 PRMT8Q9NR22 394 aaPredicted RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 MAGEC2Q9UBF1 373 aaPredicted RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 GTF3C4Q9UKN8 822 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 NDRG2Q9UN36 371 aaKnown RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 ATP6V1DQ9Y5K8 247 aa11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 PDCD11Q14690 1871 aaKnown RBP11.66□□□□□ -0.54
VTI1BP3-201ENST00000550220 EP300Q09472 2414 aaPredicted RBP11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 TGFB1I1O43294 461 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 TACC1O75410 805 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 NOL4O94818 638 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 KIF20AO95235 890 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 DLATP10515 647 aaKnown RBP11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 CHRNB1P11230 501 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 PFKLP17858 780 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 WARSP23381 471 aaKnown RBP11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 CMA1P23946 247 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 ATICP31939 592 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 GNL1P36915 607 aaPredicted RBP11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 CXCL12P48061 93 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 PPP3CCP48454 512 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 CYP4F8P98187 520 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 TRPC3Q13507 836 aa11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 ZNF268Q14587 947 aaPredicted RBP11.65□□□□□ -0.54
VTI1BP3-201ENST00000550220 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms