RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 LRG1P02750 347 aa24.05■■□□□ 1.44
BRF1-216ENST00000550208 CETN1Q12798 172 aa24.05■■□□□ 1.44
BRF1-216ENST00000550208 KCNJ12Q14500 433 aa24.05■■□□□ 1.44
BRF1-216ENST00000550208 SPPL2BQ8TCT7 592 aa24.05■■□□□ 1.44
BRF1-216ENST00000550208 C2orf15Q8WU43 125 aaKnown RBP24.05■■□□□ 1.44
BRF1-216ENST00000550208 NECTIN4Q96NY8 510 aa24.05■■□□□ 1.44
BRF1-216ENST00000550208 YIPF1Q9Y548 306 aa24.05■■□□□ 1.44
BRF1-216ENST00000550208 XIRP2A4UGR9 3374 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 XYLBO75191 536 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 HAPLN1P10915 354 aaPredicted RBP24.04■■□□□ 1.44
BRF1-216ENST00000550208 NDST1P52848 882 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 NTHL1P78549 312 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 ORC1Q13415 861 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 MGAT5BQ3V5L5 792 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 GRASPQ7Z6J2 395 aaPredicted RBP24.04■■□□□ 1.44
BRF1-216ENST00000550208 MYCBPAPQ8TBZ2 947 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 FAXDC2Q96IV6 333 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 SEPT5Q99719 369 aaPredicted RBP24.04■■□□□ 1.44
BRF1-216ENST00000550208 TUBGCP2Q9BSJ2 902 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 HCFC1R1Q9NWW0 138 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 CEP72Q9P209 647 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 DNMT3BQ9UBC3 853 aaKnown RBP24.04■■□□□ 1.44
BRF1-216ENST00000550208 HSFX1Q9UBD0 423 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 HMGXB4Q9UGU5 601 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 DOCK6Q96HP0 2047 aa24.04■■□□□ 1.44
BRF1-216ENST00000550208 C2orf16Q68DN1 1984 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 POU2F2P09086 479 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 CD58P19256 250 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 CYP2F1P24903 491 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 TUFMP49411 452 aaKnown RBP24.03■■□□□ 1.44
BRF1-216ENST00000550208 MYL5Q02045 173 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 NCAPHQ15003 741 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 MAN2A1Q16706 1144 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 TCP11X2Q5H9J9 407 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 MDH1BQ5I0G3 518 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 CDKAL1Q5VV42 579 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 SPATA2LQ8IUW3 424 aaPredicted RBP24.03■■□□□ 1.44
BRF1-216ENST00000550208 ADAMTS19Q8TE59 1207 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 MYLPFQ96A32 169 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 NECAB3Q96P71 396 aaPredicted RBP24.03■■□□□ 1.44
BRF1-216ENST00000550208 TWNKQ96RR1 684 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 ARID3AQ99856 593 aa24.03■■□□□ 1.44
BRF1-216ENST00000550208 PHF7Q9BWX1 381 aaPredicted RBP24.03■■□□□ 1.44
BRF1-216ENST00000550208 WDR6Q9NNW5 1121 aaKnown RBP24.03■■□□□ 1.44
BRF1-216ENST00000550208 PRKCSHP14314 528 aaPredicted RBP24.02■■□□□ 1.44
BRF1-216ENST00000550208 ALDH1A3P47895 512 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 CYP27A1Q02318 531 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 INCA1Q0VD86 236 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 ZSCAN23Q3MJ62 389 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 VWA3BQ502W6 1294 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 MIIPQ5JXC2 388 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 ACOT1Q86TX2 421 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 UNC93AQ86WB7 457 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 CRYBG2Q8N1P7 616 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 B3GALNT2Q8NCR0 500 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 WHAMMQ8TF30 809 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 ZNF512Q96ME7 567 aaPredicted RBP24.02■■□□□ 1.44
BRF1-216ENST00000550208 NT5C1BQ96P26 610 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 CRACR2AQ9BSW2 395 aa24.02■■□□□ 1.44
BRF1-216ENST00000550208 NAT10Q9H0A0 1025 aaKnown RBP24.02■■□□□ 1.44
BRF1-216ENST00000550208 INTS2Q9H0H0 1204 aaKnown RBP24.02■■□□□ 1.44
BRF1-216ENST00000550208 PTPN2P17706 415 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 EEF1GP26641 437 aaKnown RBP24.01■■□□□ 1.43
BRF1-216ENST00000550208 GPR15P49685 360 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 EPHB3P54753 998 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 CUL2Q13617 745 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 MAPRE1Q15691 268 aaKnown RBP24.01■■□□□ 1.43
BRF1-216ENST00000550208 C4orf50Q6ZRC1 276 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 ADHFE1Q8IWW8 467 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 HS6ST3Q8IZP7 471 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 AOPEPQ8N6M6 819 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 PCED1BQ96HM7 432 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 RPGRIP1Q96KN7 1286 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 B3GNT5Q9BYG0 378 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 ELOVL4Q9GZR5 314 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 NDST4Q9H3R1 872 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 ABCB6Q9NP58 842 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 CISHQ9NSE2 258 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 PRKAG3Q9UGI9 489 aa24.01■■□□□ 1.43
BRF1-216ENST00000550208 CILPO75339 1184 aa24■■□□□ 1.43
BRF1-216ENST00000550208 SP100P23497 879 aaPredicted RBP24■■□□□ 1.43
BRF1-216ENST00000550208 BDNFP23560 247 aa24■■□□□ 1.43
BRF1-216ENST00000550208 ZP2Q05996 745 aa24■■□□□ 1.43
BRF1-216ENST00000550208 PLD1Q13393 1074 aa24■■□□□ 1.43
BRF1-216ENST00000550208 SDHAF4Q5VUM1 108 aa24■■□□□ 1.43
BRF1-216ENST00000550208 ARHGEF19Q8IW93 802 aa24■■□□□ 1.43
BRF1-216ENST00000550208 GIPC2Q8TF65 315 aa24■■□□□ 1.43
BRF1-216ENST00000550208 FUBP3Q96I24 572 aaKnown RBP eCLIP24■■□□□ 1.43
BRF1-216ENST00000550208 TNIP3Q96KP6 325 aa24■■□□□ 1.43
BRF1-216ENST00000550208 BPIFA3Q9BQP9 254 aa24■■□□□ 1.43
BRF1-216ENST00000550208 CORO1BQ9BR76 489 aa24■■□□□ 1.43
BRF1-216ENST00000550208 TAB2Q9NYJ8 693 aa24■■□□□ 1.43
BRF1-216ENST00000550208 CLDN5O00501 218 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 ATF6P18850 670 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 SLC9A1P19634 815 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 DDR2Q16832 855 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 CFAP221Q4G0U5 840 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 ZNF394Q53GI3 561 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 IQCEQ6IPM2 695 aa23.99■■□□□ 1.43
BRF1-216ENST00000550208 GBP6Q6ZN66 633 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms