RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CCNYL1Q8N7R7 359 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 RXFP2Q8WXD0 754 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 PPP1R36Q96LQ0 422 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 INPP4AQ96PE3 977 aaPredicted RBP15.72■□□□□ 0.11
CUX1-214ENST00000550008 TXLNGQ9NUQ3 528 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 PSD3Q9NYI0 1048 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 ZNF862O60290 1169 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 ACO1P21399 889 aaKnown RBP15.71■□□□□ 0.11
CUX1-214ENST00000550008 ACAT1P24752 427 aaKnown RBP15.71■□□□□ 0.11
CUX1-214ENST00000550008 TPI1P60174 286 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 FMO1Q01740 532 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 POU5F1BQ06416 359 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 AGBL2Q5U5Z8 902 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 SPATA21Q7Z572 469 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 CRLF3Q8IUI8 442 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 KLRG1Q96E93 195 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 KREMEN1Q96MU8 473 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 PWWP2AQ96N64 755 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 TMBIM4Q9HC24 238 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 NPHS2Q9NP85 383 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 HAUS2Q9NVX0 235 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 CAPSQ13938 189 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 PRAMEF19Q5SWL8 479 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 PDGFCQ9NRA1 345 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.71■□□□□ 0.118e-7■■■□□ 15.9
CUX1-214ENST00000550008 LACTBL1A8MY62 500 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 H3BRJ5 948 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 B3GAT3O94766 335 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 NDST1P52848 882 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 DEUP1Q05D60 604 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 NR1H3Q13133 447 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 MFSD14CQ5VZR4 134 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 EEF1DP3Q658K8 133 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 C11orf63Q6NUN7 778 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 SYDE1Q6ZW31 735 aaPredicted RBP15.71■□□□□ 0.11
CUX1-214ENST00000550008 TMC3Q7Z5M5 1100 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 TTC39CQ8N584 583 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 CEP41Q9BYV8 373 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 RSAD1Q9HA92 442 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 PIH1D1Q9NWS0 290 aaKnown RBP15.71■□□□□ 0.11
CUX1-214ENST00000550008 ZFATQ9P243 1243 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 ZFP69BQ9UJL9 534 aa15.71■□□□□ 0.11
CUX1-214ENST00000550008 SLC8A1P32418 973 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 BMT2Q1RMZ1 405 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 MMEL1Q495T6 779 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 ZBTB41Q5SVQ8 909 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 BRSK2Q8IWQ3 736 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 SAMD3Q8N6K7 520 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 NLGN2Q8NFZ4 835 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 DNAJB3Q8WWF6 145 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 CAVIN3Q969G5 261 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 SYNPO2Q9UMS6 1093 aa15.71■□□□□ 0.1
CUX1-214ENST00000550008 ZNF142P52746 1687 aaPredicted RBP15.7■□□□□ 0.1
CUX1-214ENST00000550008 GAS2O43903 313 aaKnown RBP15.7■□□□□ 0.1
CUX1-214ENST00000550008 HSPA4LO95757 839 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 FAM107AO95990 144 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 RARGP13631 454 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 OAZ1P54368 228 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 ZNF844Q08AG5 666 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 SLC12A1Q13621 1099 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 COBLL1Q53SF7 1204 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 TFDP3Q5H9I0 405 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 BTBD8Q5XKL5 378 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 TRIM42Q8IWZ5 723 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 OR6P1Q8NGX9 317 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 FAM172AQ8WUF8 416 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 SHC3Q92529 594 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 PCDHB18PQ96TA0 734 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 TSR3Q9UJK0 312 aaKnown RBP15.7■□□□□ 0.1
CUX1-214ENST00000550008 AJAP1Q9UKB5 411 aaPredicted RBP15.7■□□□□ 0.1
CUX1-214ENST00000550008 FAM47DPA6NHR8 397 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 GRIK1P39086 918 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 RPL7AP62424 266 aaKnown RBP15.7■□□□□ 0.1
CUX1-214ENST00000550008 OVGP1Q12889 678 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 SPOCD1Q6ZMY3 1216 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 NUDCD1Q96RS6 583 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 ECT2Q9H8V3 914 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.7■□□□□ 0.1
CUX1-214ENST00000550008 NCAM1P13591 858 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 CPB1P15086 417 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 CENPCQ03188 943 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 JADE1Q6IE81 842 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 SCUBE3Q8IX30 993 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 FAM71AQ8IYT1 594 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 CLEC4DQ8WXI8 215 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 TMEM176AQ96HP8 235 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 SMYD3Q9H7B4 428 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 PCMTD2Q9NV79 361 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 DNPEPQ9ULA0 475 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 ZNF541Q9H0D2 1346 aa15.7■□□□□ 0.1
CUX1-214ENST00000550008 ACKR2O00590 384 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 ARFIP2P53365 341 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 MROH9Q5TGP6 573 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 PLEKHH3Q7Z736 793 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 KIAA0319LQ8IZA0 1049 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 LRRN4Q8WUT4 740 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 GYG2O15488 501 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 PSTPIP1O43586 416 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 DIAPH2O60879 1101 aa15.69■□□□□ 0.1
CUX1-214ENST00000550008 PTK7Q13308 1070 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms