RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 WDR3Q9UNX4 943 aaKnown RBP eCLIP30.56■■■□□ 2.48
BRF1-213ENST00000548421 ZKSCAN5Q9Y2L8 839 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 ATP2C2O75185 946 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 BMP8BP34820 402 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 TSPY1Q01534 308 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 INTS6LQ5JSJ4 861 aaKnown RBP30.55■■■□□ 2.48
BRF1-213ENST00000548421 PPP1R26Q5T8A7 1209 aaPredicted RBP30.55■■■□□ 2.48
BRF1-213ENST00000548421 ZNF280DQ6N043 979 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 PALB2Q86YC2 1186 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 OR10T2Q8NGX3 314 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 PCDHB18PQ96TA0 734 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 DESI2Q9BSY9 194 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 HERC2P3Q9BVR0 1158 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 CRTAC1Q9NQ79 661 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 NAGPAQ9UK23 515 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 PCDHA11Q9Y5I1 949 aa30.55■■■□□ 2.48
BRF1-213ENST00000548421 PLXNA4Q9HCM2 1894 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 FGF18O76093 207 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 CFHP08603 1231 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 SSTR3P32745 418 aaPredicted RBP30.54■■■□□ 2.48
BRF1-213ENST00000548421 KRT17Q04695 432 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 LCLAT1Q6UWP7 414 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 ANKS3Q6ZW76 656 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 ACRBPQ8NEB7 543 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 CYFIP2Q96F07 1278 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 LPIN3Q9BQK8 851 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 CHST7Q9NS84 486 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 TSPAN16Q9UKR8 245 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 NENFQ9UMX5 172 aa30.54■■■□□ 2.48
BRF1-213ENST00000548421 PDE4DIPQ5VU43 2346 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 H7C4K7 107 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 ZNF263O14978 683 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 MYOGP15173 224 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 CTNNB1P35222 781 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 BMPR1AP36894 532 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 KRT83P78385 493 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 PLCB3Q01970 1234 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 CYP27A1Q02318 531 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 CTXN3Q4LDR2 81 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 MDH1BQ5I0G3 518 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 ALKBH5Q6P6C2 394 aaKnown RBP30.53■■■□□ 2.48
BRF1-213ENST00000548421 PASD1Q8IV76 773 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 MYCBPAPQ8TBZ2 947 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 OXCT2Q9BYC2 517 aaPredicted RBP30.53■■■□□ 2.48
BRF1-213ENST00000548421 CEP83Q9Y592 693 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 ADGRG1Q9Y653 693 aa30.53■■■□□ 2.48
BRF1-213ENST00000548421 MICAL2O94851 1124 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 LSM8O95777 96 aaKnown RBP30.52■■■□□ 2.48
BRF1-213ENST00000548421 CYP1A1P04798 512 aaPredicted RBP30.52■■■□□ 2.48
BRF1-213ENST00000548421 GZMAP12544 262 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 CCDC130P13994 396 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 CLEC16AQ2KHT3 1053 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 CCDC122Q5T0U0 273 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 KIAA1841Q6NSI8 718 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 KLHL23Q8NBE8 558 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 PLVAPQ9BX97 442 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 LHX5Q9H2C1 402 aa30.52■■■□□ 2.48
BRF1-213ENST00000548421 MYBPHLA2RUH7 354 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 OR6C75A6NL08 312 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 CA3P07451 260 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 CCDC175P0C221 793 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 MAPRE1Q15691 268 aaKnown RBP30.51■■■□□ 2.48
BRF1-213ENST00000548421 GOLGA7BQ2TAP0 167 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 C10orf76Q5T2E6 689 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 FAM171BQ6P995 826 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 SLC2A14Q8TDB8 520 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 PIK3R5Q8WYR1 880 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 PKMYT1Q99640 499 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 LUC7LQ9NQ29 371 aaKnown RBP30.51■■■□□ 2.48
BRF1-213ENST00000548421 HESX1Q9UBX0 185 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 REXO2Q9Y3B8 237 aaKnown RBP30.51■■■□□ 2.48
BRF1-213ENST00000548421 MYH10P35580 1976 aa30.51■■■□□ 2.48
BRF1-213ENST00000548421 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.5■■■□□ 2.47
BRF1-213ENST00000548421 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.5■■■□□ 2.47
BRF1-213ENST00000548421 M0QYV0 167 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 UNGP13051 313 aaPredicted RBP30.5■■■□□ 2.47
BRF1-213ENST00000548421 GLUD2P49448 558 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 CCDC142Q17RM4 750 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 RIN2Q8WYP3 895 aaPredicted RBP30.5■■■□□ 2.47
BRF1-213ENST00000548421 TMEM209Q96SK2 561 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 HNRNPABQ99729 332 aaKnown RBP30.5■■■□□ 2.47
BRF1-213ENST00000548421 ZNF518BQ9C0D4 1074 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 ZCWPW1Q9H0M4 648 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.5■■■□□ 2.47
BRF1-213ENST00000548421 GTF3C4Q9UKN8 822 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 PTPRDP23468 1912 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 CDH5P33151 784 aaPredicted RBP30.5■■■□□ 2.47
BRF1-213ENST00000548421 NOMO3P69849 1222 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 DSG1Q02413 1049 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 DENND1BQ6P3S1 775 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 DCP1BQ8IZD4 617 aaKnown RBP30.5■■■□□ 2.47
BRF1-213ENST00000548421 FUKQ8N0W3 1084 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 VPS52Q8N1B4 723 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 TMEM35BQ8NCS4 154 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 PCED1BQ96HM7 432 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 TAS2R14Q9NYV8 317 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 PPP2R2CQ9Y2T4 447 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 PCDHA13Q9Y5I0 950 aa30.5■■■□□ 2.47
BRF1-213ENST00000548421 TMCO5BA8MYB1 307 aa30.49■■■□□ 2.47
BRF1-213ENST00000548421 TBC1D4O60343 1298 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms