RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 GPR88Q9GZN0 384 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 FZD8Q9H461 694 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 DNAAF2Q9NVR5 837 aaKnown RBP15.24■□□□□ 0.03
PTCH1-217ENST00000548420 PARP2Q9UGN5 583 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 SLC6A14Q9UN76 642 aa15.24■□□□□ 0.03
PTCH1-217ENST00000548420 SRPRBQ9Y5M8 271 aaKnown RBP15.24■□□□□ 0.03
PTCH1-217ENST00000548420 NOTCH2Q04721 2471 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 CBFA2T3O75081 653 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 ARF4P18085 180 aaPredicted RBP15.23■□□□□ 0.03
PTCH1-217ENST00000548420 EIF2S3P41091 472 aaKnown RBP15.23■□□□□ 0.03
PTCH1-217ENST00000548420 NAMPTP43490 491 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 ATXN3P54252 364 aaPredicted RBP15.23■□□□□ 0.03
PTCH1-217ENST00000548420 SLC12A3P55017 1021 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 ARPP19P56211 112 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 IQCEQ6IPM2 695 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 HAUS6Q7Z4H7 955 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 DAW1Q8N136 415 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 MDGA1Q8NFP4 955 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 LRRC15Q8TF66 581 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 CCDC51Q96ER9 411 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 CCSER1Q9C0I3 900 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 ASAH2Q9NR71 780 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 TOR4AQ9NXH8 423 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 FBXO2Q9UK22 296 aaPredicted RBP15.23■□□□□ 0.03
PTCH1-217ENST00000548420 DOPEY1Q5JWR5 2465 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 KNTC1P50748 2209 aa15.23■□□□□ 0.03
PTCH1-217ENST00000548420 TSC2P49815 1807 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 CEP192Q8TEP8 1941 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 A0A1B0GUA9 196 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 FAM149AA5PLN7 773 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 INO80B-WBP1J3KQ70 363 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 B4GALT5O43286 388 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 TLX3O43711 291 aaPredicted RBP15.22■□□□□ 0.03
PTCH1-217ENST00000548420 ERLIN2O94905 339 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 NPTXRO95502 500 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 HNRNPLP14866 589 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTCH1-217ENST00000548420 GUCY2CP25092 1073 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 BRCC3P46736 316 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 NASPP49321 788 aaPredicted RBP15.22■□□□□ 0.03
PTCH1-217ENST00000548420 MAPK7Q13164 816 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 SLC39A14Q15043 492 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 PPP2R5AQ15172 486 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 TRIM68Q6AZZ1 485 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 ANO7Q6IWH7 933 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 ANKS3Q6ZW76 656 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 GLRX5Q86SX6 157 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 C3orf58Q8NDZ4 430 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 TSTD1Q8NFU3 115 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 PRIMPOLQ96LW4 560 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 USP28Q96RU2 1077 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 FAM83CQ9BQN1 747 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 NTPCRQ9BSD7 190 aaKnown RBP15.22■□□□□ 0.03
PTCH1-217ENST00000548420 RUSC1Q9BVN2 902 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 TIPINQ9BVW5 301 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 CCDC113Q9H0I3 377 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 C2orf40Q9H1Z8 148 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 POLD4Q9HCU8 107 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 GKN1Q9NS71 199 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 KIAA1522Q9P206 1035 aaPredicted RBP15.22■□□□□ 0.03
PTCH1-217ENST00000548420 APOBEC2Q9Y235 224 aaKnown RBP15.22■□□□□ 0.03
PTCH1-217ENST00000548420 PCDHB9Q9Y5E1 797 aa15.22■□□□□ 0.03
PTCH1-217ENST00000548420 ABCA12Q86UK0 2595 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 CAPN8A6NHC0 703 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 LRRIQ4A6NIV6 560 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 B8ZZF3 427 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 DKK1O94907 266 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 UBA7P41226 1012 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 P2RY2P41231 377 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 GFPT1Q06210 699 aaPredicted RBP15.21■□□□□ 0.03
PTCH1-217ENST00000548420 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
PTCH1-217ENST00000548420 ARSHQ5FYA8 562 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 LPCAT2Q7L5N7 544 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 FMNL3Q8IVF7 1028 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 NAXDQ8IW45 347 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 BPIFB1Q8TDL5 484 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.03
PTCH1-217ENST00000548420 C17orf75Q9HAS0 396 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 BLOC1S4Q9NUP1 217 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 PRMT7Q9NVM4 692 aaPredicted RBP15.21■□□□□ 0.03
PTCH1-217ENST00000548420 OBP2AQ9NY56 170 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 KCND2Q9NZV8 630 aa15.21■□□□□ 0.03
PTCH1-217ENST00000548420 DAXXQ9UER7 740 aaPredicted RBP15.21■□□□□ 0.03
PTCH1-217ENST00000548420 TEX51A0A1B0GUA7 166 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 ACKR2O00590 384 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 ARHGAP33O14559 1287 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 HIP1RO75146 1068 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 SERPINF2P08697 491 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 PLA2G4BP0C869 781 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-217ENST00000548420 DRD1P21728 446 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 MARCKSP29966 332 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-217ENST00000548420 EFNA5P52803 228 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 PLCB2Q00722 1185 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 RUNX3Q13761 415 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 DUOXA1Q1HG43 343 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 USP49Q70CQ1 688 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 GAREM2Q75VX8 874 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 GPR155Q7Z3F1 870 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 ZBTB8OSQ8IWT0 167 aa15.2■□□□□ 0.02
PTCH1-217ENST00000548420 ELMOD1Q8N336 334 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms